RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 KIF3CO14782 793 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
NDE1-207ENST00000573203 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
NDE1-207ENST00000573203 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
NDE1-207ENST00000573203 SLC10A5Q5PT55 438 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 RTKN2Q8IZC4 609 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 ZNF428Q96B54 188 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 ISCA1Q9BUE6 129 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 STK31Q9BXU1 1019 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
NDE1-207ENST00000573203 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
NDE1-207ENST00000573203 TCERG1O14776 1098 aaKnown RBP11.66□□□□□ -0.54
NDE1-207ENST00000573203 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
NDE1-207ENST00000573203 C3orf67Q6ZVT6 689 aa11.66□□□□□ -0.54
NDE1-207ENST00000573203 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
NDE1-207ENST00000573203 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
NDE1-207ENST00000573203 GLTPD2A6NH11 291 aa11.65□□□□□ -0.54
NDE1-207ENST00000573203 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
NDE1-207ENST00000573203 FKBP4Q02790 459 aaKnown RBP eCLIP11.65□□□□□ -0.54
NDE1-207ENST00000573203 C16orf71Q8IYS4 520 aaPredicted RBP11.65□□□□□ -0.54
NDE1-207ENST00000573203 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
NDE1-207ENST00000573203 YTHDC1Q96MU7 727 aaKnown RBP11.65□□□□□ -0.54
NDE1-207ENST00000573203 MYD88Q99836 296 aa11.65□□□□□ -0.54
NDE1-207ENST00000573203 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
NDE1-207ENST00000573203 DDX60Q8IY21 1712 aaKnown RBP11.65□□□□□ -0.54
NDE1-207ENST00000573203 CACNA1FO60840 1977 aa11.65□□□□□ -0.55
NDE1-207ENST00000573203 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
NDE1-207ENST00000573203 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
NDE1-207ENST00000573203 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
NDE1-207ENST00000573203 DPY19L2Q6NUT2 758 aa11.64□□□□□ -0.55
NDE1-207ENST00000573203 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
NDE1-207ENST00000573203 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
NDE1-207ENST00000573203 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
NDE1-207ENST00000573203 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
NDE1-207ENST00000573203 ABCC4O15439 1325 aa11.63□□□□□ -0.55
NDE1-207ENST00000573203 MAP3K13O43283 966 aa11.63□□□□□ -0.55
NDE1-207ENST00000573203 TOMM70O94826 608 aa11.63□□□□□ -0.55
NDE1-207ENST00000573203 EXOSC9Q06265 439 aaKnown RBP11.63□□□□□ -0.55
NDE1-207ENST00000573203 GRIPAP1Q4V328 841 aa11.63□□□□□ -0.55
NDE1-207ENST00000573203 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
NDE1-207ENST00000573203 METTL22Q9BUU2 404 aaPredicted RBP11.63□□□□□ -0.55
NDE1-207ENST00000573203 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
NDE1-207ENST00000573203 TAF1P21675 1872 aa11.63□□□□□ -0.55
NDE1-207ENST00000573203 PI4KAP2A4QPH2 592 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 IRS4O14654 1257 aaPredicted RBP11.62□□□□□ -0.55
NDE1-207ENST00000573203 VAMP4O75379 141 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 PI4KAP1Q8N8J0 262 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
NDE1-207ENST00000573203 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 PSMD1Q99460 953 aa11.62□□□□□ -0.55
NDE1-207ENST00000573203 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
NDE1-207ENST00000573203 BBOX1O75936 387 aa11.61□□□□□ -0.55
NDE1-207ENST00000573203 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
NDE1-207ENST00000573203 VEGFAP15692 232 aaPredicted RBP11.61□□□□□ -0.55
NDE1-207ENST00000573203 IARSP41252 1262 aaKnown RBP11.61□□□□□ -0.55
NDE1-207ENST00000573203 NEXNQ0ZGT2 675 aa11.61□□□□□ -0.55
NDE1-207ENST00000573203 GRAPQ13588 217 aa11.61□□□□□ -0.55
NDE1-207ENST00000573203 G2E3Q7L622 706 aa11.61□□□□□ -0.55
NDE1-207ENST00000573203 GRAPLQ8TC17 118 aaPredicted RBP11.61□□□□□ -0.55
NDE1-207ENST00000573203 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
NDE1-207ENST00000573203 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
NDE1-207ENST00000573203 WDR90Q96KV7 1748 aa11.6□□□□□ -0.55
NDE1-207ENST00000573203 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
NDE1-207ENST00000573203 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
NDE1-207ENST00000573203 FLIIQ13045 1269 aa11.6□□□□□ -0.55
NDE1-207ENST00000573203 SF3B3Q15393 1217 aaKnown RBP11.6□□□□□ -0.55
NDE1-207ENST00000573203 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
NDE1-207ENST00000573203 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
NDE1-207ENST00000573203 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
NDE1-207ENST00000573203 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
NDE1-207ENST00000573203 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
NDE1-207ENST00000573203 TMC4Q7Z404 712 aa11.59□□□□□ -0.55
NDE1-207ENST00000573203 SP8Q8IXZ3 490 aa11.59□□□□□ -0.55
NDE1-207ENST00000573203 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
NDE1-207ENST00000573203 JDP2Q8WYK2 163 aa11.59□□□□□ -0.55
NDE1-207ENST00000573203 JARID2Q92833 1246 aaPredicted RBP11.59□□□□□ -0.55
NDE1-207ENST00000573203 PDE8AO60658 829 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 IGKV5-2P06315 115 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 HSPA6P17066 643 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 CWF19L2Q2TBE0 894 aaKnown RBP11.58□□□□□ -0.56
NDE1-207ENST00000573203 DPP8Q6V1X1 898 aaPredicted RBP11.58□□□□□ -0.56
NDE1-207ENST00000573203 MPNDQ8N594 471 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 SUPT20HQ8NEM7 779 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 MYH3P11055 1940 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
NDE1-207ENST00000573203 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 POTECB2RU33 542 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 E9PSI1 815 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 FZD9O00144 591 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 PPIP5K2O43314 1243 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
NDE1-207ENST00000573203 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms