RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 NMRK2Q9NPI5 230 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 HEG1Q9ULI3 1381 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 MCM10Q7L590 875 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
NPLOC4-210ENST00000572824 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
NPLOC4-210ENST00000572824 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-210ENST00000572824 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 ZPR1O75312 459 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 A1BGP04217 495 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 TBC1D9BQ66K14 1250 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 ZNF790Q6PG37 636 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 TATDN2Q93075 761 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
NPLOC4-210ENST00000572824 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 SERPINB2P05120 415 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 TEFQ10587 303 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
NPLOC4-210ENST00000572824 U2AF1L5P0DN76 240 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 HTRA3P83110 453 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 U2AF1Q01081 240 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■□□ 17.1
NPLOC4-210ENST00000572824 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 KDM4CQ9H3R0 1056 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 MIS18AQ9NYP9 233 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 USP16Q9Y5T5 823 aa12.37□□□□□ -0.43
NPLOC4-210ENST00000572824 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 THUMPD2Q9BTF0 503 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 RNF181Q9P0P0 153 aa12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 VPS9D1Q9Y2B5 631 aa12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-210ENST00000572824 BTBD11A6QL63 1104 aa12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 CAMTA2O94983 1202 aa12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 HSPA6P17066 643 aa12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 NLRP7Q8WX94 980 aa12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
NPLOC4-210ENST00000572824 NUP98P52948 1817 aa12.34□□□□□ -0.43
NPLOC4-210ENST00000572824 SMAPO00193 183 aa12.34□□□□□ -0.43
NPLOC4-210ENST00000572824 PRR5LQ6MZQ0 368 aa12.34□□□□□ -0.43
NPLOC4-210ENST00000572824 NBPF10Q6P3W6 841 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-210ENST00000572824 NBPF15Q8N660 670 aa12.34□□□□□ -0.43
NPLOC4-210ENST00000572824 RCCD1A6NED2 376 aa12.33□□□□□ -0.44
NPLOC4-210ENST00000572824 NFKBIEO00221 500 aa12.33□□□□□ -0.44
NPLOC4-210ENST00000572824 CLCN1P35523 988 aa12.33□□□□□ -0.44
NPLOC4-210ENST00000572824 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.444e-6■□□□□ 10.9
NPLOC4-210ENST00000572824 CFAP53Q96M91 514 aa12.33□□□□□ -0.44
NPLOC4-210ENST00000572824 FMNL2Q96PY5 1086 aa12.33□□□□□ -0.44
NPLOC4-210ENST00000572824 TK2O00142 265 aa12.32□□□□□ -0.44
NPLOC4-210ENST00000572824 STARD3NLO95772 234 aa12.32□□□□□ -0.44
NPLOC4-210ENST00000572824 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
NPLOC4-210ENST00000572824 IL6STP40189 918 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-210ENST00000572824 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
NPLOC4-210ENST00000572824 GIGYF2Q6Y7W6 1299 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-210ENST00000572824 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-210ENST00000572824 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.444e-14■□□□□ 10.9
NPLOC4-210ENST00000572824 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
NPLOC4-210ENST00000572824 FAM177BA6PVY3 158 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 C21orf2O43822 256 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 DNAJB2P25686 324 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 HLFQ16534 295 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 PLEKHF1Q96S99 279 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
NPLOC4-210ENST00000572824 A0A087WZG4 1122 aa12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 ADGRD1Q6QNK2 874 aa12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 SEPT9Q9UHD8 586 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 LAMB2P55268 1798 aa12.28□□□□□ -0.44
NPLOC4-210ENST00000572824 PCNTO95613 3336 aa12.27□□□□□ -0.45
NPLOC4-210ENST00000572824 COL4A5P29400 1685 aa12.27□□□□□ -0.45
NPLOC4-210ENST00000572824 H0YIN7 160 aa12.27□□□□□ -0.45
NPLOC4-210ENST00000572824 TOMM70O94826 608 aa12.27□□□□□ -0.45
NPLOC4-210ENST00000572824 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
NPLOC4-210ENST00000572824 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms