RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 HOXA10P31260 410 aaPredicted RBP27.81■■■□□ 2.04
RAB40B-207ENST00000572603 FOXO4P98177 505 aa27.81■■■□□ 2.04
RAB40B-207ENST00000572603 PDE3AQ14432 1141 aa27.81■■■□□ 2.04
RAB40B-207ENST00000572603 MASTLQ96GX5 879 aa27.81■■■□□ 2.04
RAB40B-207ENST00000572603 LRRC37AA6NMS7 1700 aa27.81■■■□□ 2.04
RAB40B-207ENST00000572603 RTL9Q8NET4 1388 aa27.79■■■□□ 2.04
RAB40B-207ENST00000572603 ITPRIPQ8IWB1 547 aa27.79■■■□□ 2.04
RAB40B-207ENST00000572603 TTLL11Q8NHH1 800 aa27.79■■■□□ 2.04
RAB40B-207ENST00000572603 MVPQ14764 893 aaKnown RBP27.78■■■□□ 2.04
RAB40B-207ENST00000572603 RPGRQ92834 1020 aaKnown RBP27.78■■■□□ 2.04
RAB40B-207ENST00000572603 WWC3Q9ULE0 1092 aa27.78■■■□□ 2.04
RAB40B-207ENST00000572603 CSF1RP07333 972 aa27.77■■■□□ 2.04
RAB40B-207ENST00000572603 ZNF622Q969S3 477 aaKnown RBP eCLIP27.77■■■□□ 2.04
RAB40B-207ENST00000572603 PIM2Q9P1W9 311 aa27.77■■■□□ 2.04
RAB40B-207ENST00000572603 GOLGB1Q14789 3259 aaKnown RBP27.76■■■□□ 2.03
RAB40B-207ENST00000572603 UBTFL1P0CB47 393 aaPredicted RBP27.76■■■□□ 2.03
RAB40B-207ENST00000572603 RABL6Q3YEC7 729 aaPredicted RBP27.76■■■□□ 2.03
RAB40B-207ENST00000572603 ANKRD44Q8N8A2 993 aa27.76■■■□□ 2.03
RAB40B-207ENST00000572603 CRAMP1Q96RY5 1269 aa27.76■■■□□ 2.03
RAB40B-207ENST00000572603 COG6Q9Y2V7 657 aa27.76■■■□□ 2.03
RAB40B-207ENST00000572603 CCDC152Q4G0S7 254 aa27.75■■■□□ 2.03
RAB40B-207ENST00000572603 CCDC85AQ96PX6 553 aaPredicted RBP27.75■■■□□ 2.03
RAB40B-207ENST00000572603 BICC1Q9H694 974 aaKnown RBP27.75■■■□□ 2.03
RAB40B-207ENST00000572603 A0A1B0GUL6 1792 aa27.74■■■□□ 2.03
RAB40B-207ENST00000572603 ZBTB7BO15156 539 aaPredicted RBP27.74■■■□□ 2.03
RAB40B-207ENST00000572603 GNAI3P08754 354 aa27.74■■■□□ 2.03
RAB40B-207ENST00000572603 FAM161AQ3B820 660 aa27.74■■■□□ 2.03
RAB40B-207ENST00000572603 PRPF40BQ6NWY9 871 aaKnown RBP27.74■■■□□ 2.03
RAB40B-207ENST00000572603 TTLL6Q8N841 843 aa27.74■■■□□ 2.03
RAB40B-207ENST00000572603 CNKSR1Q969H4 720 aa27.74■■■□□ 2.03
RAB40B-207ENST00000572603 RBM17Q96I25 401 aaKnown RBP27.74■■■□□ 2.03
RAB40B-207ENST00000572603 GREM2Q9H772 168 aa27.74■■■□□ 2.03
RAB40B-207ENST00000572603 SEC31BQ9NQW1 1179 aa27.73■■■□□ 2.03
RAB40B-207ENST00000572603 SUPT16HQ9Y5B9 1047 aaKnown RBP27.73■■■□□ 2.03
RAB40B-207ENST00000572603 LRRFIP2Q9Y608 721 aaKnown RBP27.73■■■□□ 2.03
RAB40B-207ENST00000572603 FER1L6Q2WGJ9 1857 aa27.72■■■□□ 2.03
RAB40B-207ENST00000572603 YBX3P16989 372 aaKnown RBP eCLIP27.72■■■□□ 2.03
RAB40B-207ENST00000572603 DALRD3Q5D0E6 543 aaKnown RBP27.72■■■□□ 2.03
RAB40B-207ENST00000572603 LMBR1LQ6UX01 489 aa27.72■■■□□ 2.03
RAB40B-207ENST00000572603 DDX46Q7L014 1031 aaKnown RBP27.72■■■□□ 2.03
RAB40B-207ENST00000572603 SLC51AQ86UW1 340 aa27.72■■■□□ 2.03
RAB40B-207ENST00000572603 SNED1Q8TER0 1413 aa27.72■■■□□ 2.03
RAB40B-207ENST00000572603 GRAPQ13588 217 aa27.71■■■□□ 2.03
RAB40B-207ENST00000572603 LTBP1Q14766 1721 aa27.71■■■□□ 2.03
RAB40B-207ENST00000572603 GRAPLQ8TC17 118 aaPredicted RBP27.71■■■□□ 2.03
RAB40B-207ENST00000572603 CELF1Q92879 486 aaKnown RBP27.71■■■□□ 2.03
RAB40B-207ENST00000572603 ALDH1B1P30837 517 aa27.7■■■□□ 2.02
RAB40B-207ENST00000572603 DDX19BQ9UMR2 479 aa27.7■■■□□ 2.02
RAB40B-207ENST00000572603 BCS1LQ9Y276 419 aa27.7■■■□□ 2.02
RAB40B-207ENST00000572603 C7orf43Q8WVR3 580 aa27.69■■■□□ 2.02
RAB40B-207ENST00000572603 GNAI2P04899 355 aa27.67■■■□□ 2.02
RAB40B-207ENST00000572603 ITGA6P23229 1130 aa27.67■■■□□ 2.02
RAB40B-207ENST00000572603 PPEF1O14829 653 aaPredicted RBP27.66■■■□□ 2.02
RAB40B-207ENST00000572603 C1orf115Q9H7X2 142 aa27.66■■■□□ 2.02
RAB40B-207ENST00000572603 ZBTB40Q9NUA8 1239 aa27.65■■■□□ 2.02
RAB40B-207ENST00000572603 HDAC5Q9UQL6 1122 aa27.65■■■□□ 2.02
RAB40B-207ENST00000572603 CHMP3Q9Y3E7 222 aa27.65■■■□□ 2.02
RAB40B-207ENST00000572603 DUOX1Q9NRD9 1551 aa27.65■■■□□ 2.02
RAB40B-207ENST00000572603 BBOX1O75936 387 aa27.64■■■□□ 2.02
RAB40B-207ENST00000572603 MTX1Q13505 466 aa27.64■■■□□ 2.02
RAB40B-207ENST00000572603 OLFM4Q6UX06 510 aa27.64■■■□□ 2.02
RAB40B-207ENST00000572603 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.02
RAB40B-207ENST00000572603 C21orf2O43822 256 aa27.63■■■□□ 2.01
RAB40B-207ENST00000572603 RFX5P48382 616 aaPredicted RBP27.63■■■□□ 2.01
RAB40B-207ENST00000572603 RPS8P62241 208 aaKnown RBP27.63■■■□□ 2.01
RAB40B-207ENST00000572603 CRBNQ96SW2 442 aa27.63■■■□□ 2.01
RAB40B-207ENST00000572603 CDC5LQ99459 802 aaKnown RBP27.63■■■□□ 2.01
RAB40B-207ENST00000572603 ZNF219Q9P2Y4 722 aaPredicted RBP27.63■■■□□ 2.01
RAB40B-207ENST00000572603 ANKRD18BA2A2Z9 1011 aa27.62■■■□□ 2.01
RAB40B-207ENST00000572603 IFIT5Q13325 482 aaKnown RBP27.62■■■□□ 2.01
RAB40B-207ENST00000572603 ATP6V0A2Q9Y487 856 aa27.62■■■□□ 2.01
RAB40B-207ENST00000572603 SBF1O95248 1867 aa27.61■■■□□ 2.01
RAB40B-207ENST00000572603 GPR162Q16538 588 aa27.61■■■□□ 2.01
RAB40B-207ENST00000572603 ANKRD18AQ8IVF6 992 aa27.61■■■□□ 2.01
RAB40B-207ENST00000572603 CCDC57Q2TAC2 916 aa27.6■■■□□ 2.01
RAB40B-207ENST00000572603 TMC4Q7Z404 712 aa27.6■■■□□ 2.01
RAB40B-207ENST00000572603 ZNF594Q96JF6 807 aaPredicted RBP27.6■■■□□ 2.01
RAB40B-207ENST00000572603 UTRNP46939 3433 aa27.59■■■□□ 2.01
RAB40B-207ENST00000572603 SP8Q8IXZ3 490 aa27.59■■■□□ 2.01
RAB40B-207ENST00000572603 CCDC88AQ3V6T2 1871 aa27.59■■■□□ 2.01
RAB40B-207ENST00000572603 PNMA6EA0A0J9YXQ4 647 aa27.58■■■□□ 2.01
RAB40B-207ENST00000572603 CCDC93Q567U6 631 aa27.58■■■□□ 2.01
RAB40B-207ENST00000572603 NFKBIEO00221 500 aa27.57■■■□□ 2
RAB40B-207ENST00000572603 CENPBP07199 599 aaPredicted RBP27.57■■■□□ 2
RAB40B-207ENST00000572603 IGHMBP2P38935 993 aaKnown RBP27.57■■■□□ 2
RAB40B-207ENST00000572603 CEP85Q6P2H3 762 aa27.57■■■□□ 2
RAB40B-207ENST00000572603 KLHDC4Q8TBB5 520 aa27.57■■■□□ 2
RAB40B-207ENST00000572603 CHMP4BQ9H444 224 aaKnown RBP27.57■■■□□ 2
RAB40B-207ENST00000572603 BSDC1Q9NW68 430 aaPredicted RBP27.57■■■□□ 2
RAB40B-207ENST00000572603 PTPN12Q05209 780 aaKnown RBP27.56■■■□□ 2
RAB40B-207ENST00000572603 SOGA3Q5TF21 947 aa27.56■■■□□ 2
RAB40B-207ENST00000572603 CC2D2BQ6DHV5 1058 aa27.56■■■□□ 2
RAB40B-207ENST00000572603 SRGAP3O43295 1099 aa27.55■■■□□ 2
RAB40B-207ENST00000572603 DICER1Q9UPY3 1922 aaKnown RBP27.55■■■□□ 2
RAB40B-207ENST00000572603 ATP8B2P98198 1209 aa27.54■■■□□ 2
RAB40B-207ENST00000572603 POLA2Q14181 598 aa27.54■■■□□ 2
RAB40B-207ENST00000572603 PUS3Q9BZE2 481 aaKnown RBP27.54■■■□□ 2
RAB40B-207ENST00000572603 CHD4Q14839 1912 aa27.53■■■□□ 2
RAB40B-207ENST00000572603 LTBP3Q9NS15 1303 aa27.53■■■□□ 2
RAB40B-207ENST00000572603 GRIN3BO60391 1043 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms