RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 GRAPLQ8TC17 118 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 ARHGAP45Q92619 1136 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 TAF1P21675 1872 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 CHD4Q14839 1912 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 LAMB2P55268 1798 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 GRM8O00222 908 aa11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 C9orf131Q5VYM1 1079 aa11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 ATP6V0A2Q9Y487 856 aa11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 UTRNP46939 3433 aa11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 UTYO14607 1347 aa11.02□□□□□ -0.65
TRAPPC1-203ENST00000571739 COL4A1P02462 1669 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 SNED1Q8TER0 1413 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 HSP90B1P14625 803 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 CTSWP56202 376 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 CCDC152Q4G0S7 254 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 CCDC93Q567U6 631 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 SOGA3Q5TF21 947 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 GREM2Q9H772 168 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 C9orf78Q9NZ63 289 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 LTBP3Q9NS15 1303 aa11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-203ENST00000571739 SBF1O95248 1867 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 CACNA1SQ13698 1873 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 TRIM27P14373 513 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 LMNB1P20700 586 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
TRAPPC1-203ENST00000571739 RTKN2Q8IZC4 609 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 FRAT1Q92837 279 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-203ENST00000571739 SUCLG2Q96I99 432 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 TAOK3Q9H2K8 898 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 FER1L6Q2WGJ9 1857 aa11□□□□□ -0.65
TRAPPC1-203ENST00000571739 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 LMBR1LQ6UX01 489 aa10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 YTHDC1Q96MU7 727 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 ZNF277Q9NRM2 450 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
TRAPPC1-203ENST00000571739 ITGA6P23229 1130 aa10.98□□□□□ -0.65
TRAPPC1-203ENST00000571739 ZKSCAN2Q63HK3 967 aa10.98□□□□□ -0.65
TRAPPC1-203ENST00000571739 CLUAP1Q96AJ1 413 aa10.98□□□□□ -0.65
TRAPPC1-203ENST00000571739 PSMD1Q99460 953 aa10.98□□□□□ -0.65
TRAPPC1-203ENST00000571739 RTFDC1Q9BY42 306 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-203ENST00000571739 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
TRAPPC1-203ENST00000571739 WTIPA6NIX2 430 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 GPSM2P81274 684 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 ANKRD18AQ8IVF6 992 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 MPNDQ8N594 471 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 NSFL1CQ9UNZ2 370 aaKnown RBP10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 RTL9Q8NET4 1388 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 CCDC88AQ3V6T2 1871 aa10.97□□□□□ -0.65
TRAPPC1-203ENST00000571739 RLBP1P12271 317 aa10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 RABL6Q3YEC7 729 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 ZNF594Q96JF6 807 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 BICC1Q9H694 974 aaKnown RBP10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 BSDC1Q9NW68 430 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 POLLQ9UGP5 575 aa10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 MINPP1Q9UNW1 487 aa10.96□□□□□ -0.65
TRAPPC1-203ENST00000571739 ANKRD18BA2A2Z9 1011 aa10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 IFIT5Q13325 482 aaKnown RBP10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 DPP8Q6V1X1 898 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 CDC5LQ99459 802 aaKnown RBP10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 MEIS3Q99687 375 aa10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 TMX4Q9H1E5 349 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
TRAPPC1-203ENST00000571739 FZD9O00144 591 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 PLIN1O60240 522 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 AOC3Q16853 763 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 ZNF526Q8TF50 670 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 GPR101Q96P66 508 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 VPS33BQ9H267 617 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 MYH3P11055 1940 aa10.94□□□□□ -0.66
TRAPPC1-203ENST00000571739 COL4A5P29400 1685 aa10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 GLTPD2A6NH11 291 aa10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 POTECB2RU33 542 aa10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 ZBTB7BO15156 539 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 IGHMBP2P38935 993 aaKnown RBP10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 RFX5P48382 616 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC1-203ENST00000571739 KIAA2012Q0VF49 1180 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms