RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 BBOX1O75936 387 aa16.19■□□□□ 0.18
TVP23B-204ENST00000571018 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
TVP23B-204ENST00000571018 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
TVP23B-204ENST00000571018 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
TVP23B-204ENST00000571018 TRMT2AQ8IZ69 625 aaKnown RBP16.19■□□□□ 0.18
TVP23B-204ENST00000571018 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
TVP23B-204ENST00000571018 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
TVP23B-204ENST00000571018 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
TVP23B-204ENST00000571018 LAMB2P55268 1798 aa16.18■□□□□ 0.18
TVP23B-204ENST00000571018 DNAAF4Q8WXU2 420 aa16.18■□□□□ 0.18
TVP23B-204ENST00000571018 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
TVP23B-204ENST00000571018 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
TVP23B-204ENST00000571018 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 GRAPQ13588 217 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
TVP23B-204ENST00000571018 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 GRAPLQ8TC17 118 aaPredicted RBP16.17■□□□□ 0.18
TVP23B-204ENST00000571018 PSMD1Q99460 953 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
TVP23B-204ENST00000571018 GLTPD2A6NH11 291 aa16.16■□□□□ 0.18
TVP23B-204ENST00000571018 KIF3CO14782 793 aa16.16■□□□□ 0.18
TVP23B-204ENST00000571018 PDE8AO60658 829 aa16.16■□□□□ 0.18
TVP23B-204ENST00000571018 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
TVP23B-204ENST00000571018 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
TVP23B-204ENST00000571018 JARID2Q92833 1246 aaPredicted RBP16.16■□□□□ 0.18
TVP23B-204ENST00000571018 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
TVP23B-204ENST00000571018 CCDC88AQ3V6T2 1871 aa16.16■□□□□ 0.18
TVP23B-204ENST00000571018 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
TVP23B-204ENST00000571018 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
TVP23B-204ENST00000571018 NMRK2Q9NPI5 230 aa16.15■□□□□ 0.18
TVP23B-204ENST00000571018 ZNF277Q9NRM2 450 aaPredicted RBP16.15■□□□□ 0.18
TVP23B-204ENST00000571018 F6X3S4 739 aa16.14■□□□□ 0.17
TVP23B-204ENST00000571018 H7C1W4 665 aa16.14■□□□□ 0.17
TVP23B-204ENST00000571018 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
TVP23B-204ENST00000571018 C1QTNF8P60827 252 aa16.14■□□□□ 0.17
TVP23B-204ENST00000571018 GCKRQ14397 625 aa16.14■□□□□ 0.17
TVP23B-204ENST00000571018 DPY19L2Q6NUT2 758 aa16.14■□□□□ 0.17
TVP23B-204ENST00000571018 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
TVP23B-204ENST00000571018 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
TVP23B-204ENST00000571018 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
TVP23B-204ENST00000571018 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
TVP23B-204ENST00000571018 MRPL50Q8N5N7 158 aaKnown RBP16.13■□□□□ 0.17
TVP23B-204ENST00000571018 CELF1Q92879 486 aaKnown RBP16.13■□□□□ 0.17
TVP23B-204ENST00000571018 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
TVP23B-204ENST00000571018 UBE3BQ7Z3V4 1068 aa16.12■□□□□ 0.17
TVP23B-204ENST00000571018 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
TVP23B-204ENST00000571018 CASP7P55210 303 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 CTSWP56202 376 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 RPS8P62241 208 aaKnown RBP16.11■□□□□ 0.17
TVP23B-204ENST00000571018 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 MPNDQ8N594 471 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 RTFDC1Q9BY42 306 aaPredicted RBP16.11■□□□□ 0.17
TVP23B-204ENST00000571018 VPS33BQ9H267 617 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 SEC31BQ9NQW1 1179 aa16.11■□□□□ 0.17
TVP23B-204ENST00000571018 DPP8Q6V1X1 898 aaPredicted RBP16.1■□□□□ 0.17
TVP23B-204ENST00000571018 SUPT20HQ8NEM7 779 aa16.1■□□□□ 0.17
TVP23B-204ENST00000571018 TTLL11Q8NHH1 800 aa16.1■□□□□ 0.17
TVP23B-204ENST00000571018 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
TVP23B-204ENST00000571018 PLA2G12BQ9BX93 195 aa16.1■□□□□ 0.17
TVP23B-204ENST00000571018 TAF1P21675 1872 aa16.1■□□□□ 0.17
TVP23B-204ENST00000571018 COL4A1P02462 1669 aa16.09■□□□□ 0.17
TVP23B-204ENST00000571018 FZD9O00144 591 aa16.09■□□□□ 0.17
TVP23B-204ENST00000571018 TOMM70O94826 608 aa16.09■□□□□ 0.17
TVP23B-204ENST00000571018 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
TVP23B-204ENST00000571018 HNRNPUQ00839 825 aaKnown RBP eCLIP16.09■□□□□ 0.17
TVP23B-204ENST00000571018 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
TVP23B-204ENST00000571018 PTPRCP08575 1304 aa16.09■□□□□ 0.17
TVP23B-204ENST00000571018 LRRC37AA6NMS7 1700 aa16.08■□□□□ 0.17
TVP23B-204ENST00000571018 ALDH1L1O75891 902 aa16.08■□□□□ 0.16
TVP23B-204ENST00000571018 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.16
TVP23B-204ENST00000571018 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.16
TVP23B-204ENST00000571018 LARGE2Q8N3Y3 721 aa16.08■□□□□ 0.16
TVP23B-204ENST00000571018 BCL2L13Q9BXK5 485 aa16.08■□□□□ 0.16
TVP23B-204ENST00000571018 RTL9Q8NET4 1388 aa16.08■□□□□ 0.16
TVP23B-204ENST00000571018 POTECB2RU33 542 aa16.07■□□□□ 0.16
TVP23B-204ENST00000571018 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
TVP23B-204ENST00000571018 SRCIN1Q9C0H9 1055 aa16.07■□□□□ 0.16
TVP23B-204ENST00000571018 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
TVP23B-204ENST00000571018 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
TVP23B-204ENST00000571018 COL4A5P29400 1685 aa16.07■□□□□ 0.16
TVP23B-204ENST00000571018 WDR90Q96KV7 1748 aa16.07■□□□□ 0.16
TVP23B-204ENST00000571018 ZNF541Q9H0D2 1346 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 GRM8O00222 908 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 CSF1RP07333 972 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 GPSM2P81274 684 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 AOC3Q16853 763 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 ANKRD18AQ8IVF6 992 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 C16orf71Q8IYS4 520 aaPredicted RBP16.06■□□□□ 0.16
TVP23B-204ENST00000571018 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
TVP23B-204ENST00000571018 GREM2Q9H772 168 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 SMC4Q9NTJ3 1288 aa16.06■□□□□ 0.16
TVP23B-204ENST00000571018 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
TVP23B-204ENST00000571018 BRPF1P55201 1214 aaPredicted RBP16.05■□□□□ 0.16
TVP23B-204ENST00000571018 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
TVP23B-204ENST00000571018 RBM46Q8TBY0 533 aaKnown RBP16.05■□□□□ 0.16
TVP23B-204ENST00000571018 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms