RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TRIP4Q15650 581 aaPredicted RBP7.66□□□□□ -1.18
NUP88-202ENST00000570937 NOM1Q5C9Z4 860 aaKnown RBP7.66□□□□□ -1.18
NUP88-202ENST00000570937 EGFL7Q9UHF1 273 aa7.66□□□□□ -1.18
NUP88-202ENST00000570937 MPSTP25325 297 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 FKBP4Q02790 459 aaKnown RBP eCLIP7.65□□□□□ -1.18
NUP88-202ENST00000570937 PCSK7Q16549 785 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 ALKBH2Q6NS38 261 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 DHX32Q7L7V1 743 aaKnown RBP7.65□□□□□ -1.18
NUP88-202ENST00000570937 TXNDC2Q86VQ3 553 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 TMEM151AQ8N4L1 468 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 TRPM4Q8TD43 1214 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 GPR152Q8TDT2 470 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 UBE2OQ9C0C9 1292 aaKnown RBP7.65□□□□□ -1.18
NUP88-202ENST00000570937 RRAGCQ9HB90 399 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 STARD13Q9Y3M8 1113 aa7.65□□□□□ -1.18
NUP88-202ENST00000570937 PIK3R2O00459 728 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 FAM13AO94988 1023 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 GDF11O95390 407 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 RARAP10276 462 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 IRS1P35568 1242 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 EIF1AXP47813 144 aaKnown RBP7.64□□□□□ -1.19
NUP88-202ENST00000570937 MTMR3Q13615 1198 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 KRT25Q7Z3Z0 450 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 PRDM6Q9NQX0 595 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
NUP88-202ENST00000570937 SLC6A14Q9UN76 642 aa7.64□□□□□ -1.19
NUP88-202ENST00000570937 FNDC3AQ9Y2H6 1198 aaKnown RBP7.64□□□□□ -1.19
NUP88-202ENST00000570937 UBAP1LF5GYI3 381 aa7.63□□□□□ -1.19
NUP88-202ENST00000570937 RPLP1P05386 114 aaKnown RBP7.63□□□□□ -1.19
NUP88-202ENST00000570937 HOXD8P13378 290 aaPredicted RBP7.63□□□□□ -1.19
NUP88-202ENST00000570937 SOX18P35713 384 aa7.63□□□□□ -1.19
NUP88-202ENST00000570937 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
NUP88-202ENST00000570937 NLRP13Q86W25 1043 aa7.63□□□□□ -1.19
NUP88-202ENST00000570937 ATCAYQ86WG3 371 aa7.63□□□□□ -1.19
NUP88-202ENST00000570937 TLR7Q9NYK1 1049 aaKnown RBP7.63□□□□□ -1.19
NUP88-202ENST00000570937 ZBTB42B2RXF5 422 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 GNB5O14775 395 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 ICMTO60725 284 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 BRD1O95696 1058 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 MZF1P28698 734 aaPredicted RBP7.62□□□□□ -1.19
NUP88-202ENST00000570937 NRLP54845 237 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 GPLD1P80108 840 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 MICALL1Q8N3F8 863 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 KCTD17Q8N5Z5 321 aa7.62□□□□□ -1.19
NUP88-202ENST00000570937 NUDT16Q96DE0 195 aaKnown RBP7.62□□□□□ -1.19
NUP88-202ENST00000570937 M0R082 166 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 MMP20O60882 483 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 ABL1P00519 1130 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 ALBP02768 609 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 SERPINB4P48594 390 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 ZNF211Q13398 564 aaPredicted RBP7.61□□□□□ -1.19
NUP88-202ENST00000570937 PDE12Q6L8Q7 609 aaKnown RBP7.61□□□□□ -1.19
NUP88-202ENST00000570937 XKR5Q6UX68 686 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 ZNF417Q8TAU3 575 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 EDEM1Q92611 657 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 ZNF587Q96SQ5 575 aaPredicted RBP7.61□□□□□ -1.19
NUP88-202ENST00000570937 IGFLR1Q9H665 355 aa7.61□□□□□ -1.19
NUP88-202ENST00000570937 PDGFAP04085 211 aa7.6□□□□□ -1.19
NUP88-202ENST00000570937 PLAURQ03405 335 aa7.6□□□□□ -1.19
NUP88-202ENST00000570937 TBC1D8BQ0IIM8 1120 aa7.6□□□□□ -1.19
NUP88-202ENST00000570937 COL9A3Q14050 684 aaPredicted RBP7.6□□□□□ -1.19
NUP88-202ENST00000570937 ECM1Q16610 540 aa7.6□□□□□ -1.19
NUP88-202ENST00000570937 ALYREFQ86V81 257 aaKnown RBP7.6□□□□□ -1.19
NUP88-202ENST00000570937 FRRS1LQ9P0K9 344 aa7.6□□□□□ -1.19
NUP88-202ENST00000570937 NAGPAQ9UK23 515 aa7.6□□□□□ -1.19
NUP88-202ENST00000570937 GNEQ9Y223 722 aaKnown RBP7.6□□□□□ -1.19
NUP88-202ENST00000570937 PSAPP07602 524 aa7.59□□□□□ -1.19
NUP88-202ENST00000570937 PCSK2P16519 638 aa7.59□□□□□ -1.19
NUP88-202ENST00000570937 DNM1Q05193 864 aaKnown RBP7.59□□□□□ -1.19
NUP88-202ENST00000570937 OR13H1Q8NG92 308 aa7.59□□□□□ -1.19
NUP88-202ENST00000570937 CCER1Q8TC90 406 aaPredicted RBP7.59□□□□□ -1.19
NUP88-202ENST00000570937 ANO2Q9NQ90 1003 aa7.59□□□□□ -1.19
NUP88-202ENST00000570937 FZD6O60353 706 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 FAM35AQ86V20 835 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 TTC9Q92623 222 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 TRIM11Q96F44 468 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 GGNBP2Q9H3C7 697 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 SUV39H2Q9H5I1 410 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 ABI2Q9NYB9 513 aaPredicted RBP7.58□□□□□ -1.2
NUP88-202ENST00000570937 NOP53Q9NZM5 478 aaKnown RBP7.58□□□□□ -1.2
NUP88-202ENST00000570937 POLIQ9UNA4 740 aa7.58□□□□□ -1.2
NUP88-202ENST00000570937 LILRB5O75023 590 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 NID1P14543 1247 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 COL8A1P27658 744 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 USP5P45974 858 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 PSAPL1Q6NUJ1 521 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 GLYCTKQ8IVS8 523 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 LPIN3Q9BQK8 851 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 TRAIPQ9BWF2 469 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 ELP3Q9H9T3 547 aa7.57□□□□□ -1.2
NUP88-202ENST00000570937 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 H3BRB1 525 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 CPB1P15086 417 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 SIK1P57059 783 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 ARHGAP4P98171 946 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 EHHADHQ08426 723 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 PERM1Q5SV97 790 aa7.56□□□□□ -1.2
NUP88-202ENST00000570937 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
NUP88-202ENST00000570937 ILDR2Q71H61 639 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms