RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 COPS6Q7L5N1 327 aa24.9■■□□□ 1.58
SCARF1-204ENST00000570902 NLRP10Q86W26 655 aa24.9■■□□□ 1.58
SCARF1-204ENST00000570902 BCL2L13Q9BXK5 485 aa24.9■■□□□ 1.58
SCARF1-204ENST00000570902 ANKRD36CQ5JPF3 1778 aa24.9■■□□□ 1.58
SCARF1-204ENST00000570902 CELF2O95319 508 aaKnown RBP24.89■■□□□ 1.58
SCARF1-204ENST00000570902 TMC4Q7Z404 712 aa24.89■■□□□ 1.58
SCARF1-204ENST00000570902 ZC3H15Q8WU90 426 aaKnown RBP24.89■■□□□ 1.58
SCARF1-204ENST00000570902 PGAP2Q9UHJ9 254 aa24.89■■□□□ 1.58
SCARF1-204ENST00000570902 SH3TC1Q8TE82 1336 aa24.88■■□□□ 1.57
SCARF1-204ENST00000570902 HCLS1P14317 486 aaPredicted RBP24.88■■□□□ 1.57
SCARF1-204ENST00000570902 TCIRG1Q13488 830 aa24.88■■□□□ 1.57
SCARF1-204ENST00000570902 GRAPQ13588 217 aa24.88■■□□□ 1.57
SCARF1-204ENST00000570902 SAPCD2Q86UD0 394 aa24.88■■□□□ 1.57
SCARF1-204ENST00000570902 GRAPLQ8TC17 118 aaPredicted RBP24.88■■□□□ 1.57
SCARF1-204ENST00000570902 HHIPL1Q96JK4 782 aa24.88■■□□□ 1.57
SCARF1-204ENST00000570902 TRMT112Q9UI30 125 aaKnown RBP24.88■■□□□ 1.57
SCARF1-204ENST00000570902 LAMB2P55268 1798 aa24.88■■□□□ 1.57
SCARF1-204ENST00000570902 CA12O43570 354 aa24.87■■□□□ 1.57
SCARF1-204ENST00000570902 AIMP1Q12904 312 aaKnown RBP24.87■■□□□ 1.57
SCARF1-204ENST00000570902 XAGE3Q8WTP9 111 aa24.87■■□□□ 1.57
SCARF1-204ENST00000570902 RAD17O75943 681 aa24.86■■□□□ 1.57
SCARF1-204ENST00000570902 GLIS2Q9BZE0 524 aaPredicted RBP24.86■■□□□ 1.57
SCARF1-204ENST00000570902 AOC2O75106 756 aa24.85■■□□□ 1.57
SCARF1-204ENST00000570902 NECTIN2Q92692 538 aa24.85■■□□□ 1.57
SCARF1-204ENST00000570902 TMPOP42166 694 aaKnown RBP24.84■■□□□ 1.57
SCARF1-204ENST00000570902 CDC37L1Q7L3B6 337 aa24.84■■□□□ 1.57
SCARF1-204ENST00000570902 H7C1D1 291 aa24.83■■□□□ 1.57
SCARF1-204ENST00000570902 CNOT7Q9UIV1 285 aaKnown RBP24.83■■□□□ 1.57
SCARF1-204ENST00000570902 HIRAP54198 1017 aaPredicted RBP24.82■■□□□ 1.56
SCARF1-204ENST00000570902 BRPF1P55201 1214 aaPredicted RBP24.82■■□□□ 1.56
SCARF1-204ENST00000570902 ZNF408Q9H9D4 720 aa24.82■■□□□ 1.56
SCARF1-204ENST00000570902 CCDC85CA6NKD9 419 aa24.81■■□□□ 1.56
SCARF1-204ENST00000570902 TRPM4Q8TD43 1214 aa24.81■■□□□ 1.56
SCARF1-204ENST00000570902 YDJCA8MPS7 323 aa24.8■■□□□ 1.56
SCARF1-204ENST00000570902 RALBP1Q15311 655 aa24.8■■□□□ 1.56
SCARF1-204ENST00000570902 FAM161AQ3B820 660 aa24.8■■□□□ 1.56
SCARF1-204ENST00000570902 TSKSQ9UJT2 592 aa24.8■■□□□ 1.56
SCARF1-204ENST00000570902 LRRC37AA6NMS7 1700 aa24.8■■□□□ 1.56
SCARF1-204ENST00000570902 DUOX1Q9NRD9 1551 aa24.8■■□□□ 1.56
SCARF1-204ENST00000570902 WASHC4Q2M389 1173 aa24.79■■□□□ 1.56
SCARF1-204ENST00000570902 MICALL2Q8IY33 904 aa24.79■■□□□ 1.56
SCARF1-204ENST00000570902 PLBD2Q8NHP8 589 aa24.79■■□□□ 1.56
SCARF1-204ENST00000570902 DPF2Q92785 391 aa24.79■■□□□ 1.56
SCARF1-204ENST00000570902 CHL1O00533 1208 aa24.78■■□□□ 1.56
SCARF1-204ENST00000570902 CHPF2Q9P2E5 772 aa24.78■■□□□ 1.56
SCARF1-204ENST00000570902 NSFL1CQ9UNZ2 370 aaKnown RBP24.77■■□□□ 1.56
SCARF1-204ENST00000570902 HOXB7P09629 217 aa24.76■■□□□ 1.55
SCARF1-204ENST00000570902 NOGQ13253 232 aa24.76■■□□□ 1.55
SCARF1-204ENST00000570902 SF3B3Q15393 1217 aaKnown RBP24.76■■□□□ 1.55
SCARF1-204ENST00000570902 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
SCARF1-204ENST00000570902 ANKRD13DQ6ZTN6 518 aa24.76■■□□□ 1.55
SCARF1-204ENST00000570902 DDX60Q8IY21 1712 aaKnown RBP24.75■■□□□ 1.55
SCARF1-204ENST00000570902 TAF1P21675 1872 aa24.75■■□□□ 1.55
SCARF1-204ENST00000570902 SHTN1A0MZ66 631 aa24.75■■□□□ 1.55
SCARF1-204ENST00000570902 MLLT1Q03111 559 aaPredicted RBP24.75■■□□□ 1.55
SCARF1-204ENST00000570902 NEUROD2Q15784 382 aa24.75■■□□□ 1.55
SCARF1-204ENST00000570902 KRT24Q2M2I5 525 aa24.75■■□□□ 1.55
SCARF1-204ENST00000570902 USP48Q86UV5 1035 aa24.75■■□□□ 1.55
SCARF1-204ENST00000570902 ISCA1Q9BUE6 129 aa24.75■■□□□ 1.55
SCARF1-204ENST00000570902 DBF4Q9UBU7 674 aaPredicted RBP24.75■■□□□ 1.55
SCARF1-204ENST00000570902 ZBTB12Q9Y330 459 aaPredicted RBP24.75■■□□□ 1.55
SCARF1-204ENST00000570902 LAS1LQ9Y4W2 734 aaKnown RBP24.75■■□□□ 1.55
SCARF1-204ENST00000570902 PSMD14O00487 310 aa24.74■■□□□ 1.55
SCARF1-204ENST00000570902 RPS12P25398 132 aaKnown RBP24.74■■□□□ 1.55
SCARF1-204ENST00000570902 RGS19P49795 217 aa24.74■■□□□ 1.55
SCARF1-204ENST00000570902 HUNKP57058 714 aa24.74■■□□□ 1.55
SCARF1-204ENST00000570902 CELF1Q92879 486 aaKnown RBP24.74■■□□□ 1.55
SCARF1-204ENST00000570902 FAM89AQ96GI7 184 aa24.74■■□□□ 1.55
SCARF1-204ENST00000570902 EYA3Q99504 573 aa24.74■■□□□ 1.55
SCARF1-204ENST00000570902 DBNDD1Q9H9R9 158 aa24.74■■□□□ 1.55
SCARF1-204ENST00000570902 C6orf229H3BNL8 230 aa24.73■■□□□ 1.55
SCARF1-204ENST00000570902 SAMD7Q7Z3H4 446 aa24.73■■□□□ 1.55
SCARF1-204ENST00000570902 RIMBP2O15034 1052 aa24.72■■□□□ 1.55
SCARF1-204ENST00000570902 KRT26Q7Z3Y9 468 aa24.72■■□□□ 1.55
SCARF1-204ENST00000570902 CCDC146Q8IYE0 955 aa24.72■■□□□ 1.55
SCARF1-204ENST00000570902 ZNF428Q96B54 188 aa24.72■■□□□ 1.55
SCARF1-204ENST00000570902 MCOLN1Q9GZU1 580 aa24.72■■□□□ 1.55
SCARF1-204ENST00000570902 ATP5J2-PTCD1G3V325 749 aa24.71■■□□□ 1.55
SCARF1-204ENST00000570902 GPSM2P81274 684 aa24.71■■□□□ 1.55
SCARF1-204ENST00000570902 TBC1D10BQ4KMP7 808 aaPredicted RBP24.71■■□□□ 1.55
SCARF1-204ENST00000570902 RUNDC1Q96C34 613 aa24.71■■□□□ 1.55
SCARF1-204ENST00000570902 HYPKQ9NX55 129 aa24.71■■□□□ 1.55
SCARF1-204ENST00000570902 POLLQ9UGP5 575 aa24.71■■□□□ 1.55
SCARF1-204ENST00000570902 ECE2O60344 883 aa24.7■■□□□ 1.54
SCARF1-204ENST00000570902 DCPSQ96C86 337 aaKnown RBP24.7■■□□□ 1.54
SCARF1-204ENST00000570902 TRIM35Q9UPQ4 493 aa24.7■■□□□ 1.54
SCARF1-204ENST00000570902 IRS4O14654 1257 aaPredicted RBP24.69■■□□□ 1.54
SCARF1-204ENST00000570902 TRIM28Q13263 835 aaKnown RBP24.69■■□□□ 1.54
SCARF1-204ENST00000570902 C2orf69Q8N8R5 385 aa24.69■■□□□ 1.54
SCARF1-204ENST00000570902 GBA2Q9HCG7 927 aaPredicted RBP24.69■■□□□ 1.54
SCARF1-204ENST00000570902 MYBBP1AQ9BQG0 1328 aaKnown RBP24.68■■□□□ 1.54
SCARF1-204ENST00000570902 HSP90B1P14625 803 aaKnown RBP24.68■■□□□ 1.54
SCARF1-204ENST00000570902 RPS8P62241 208 aaKnown RBP24.68■■□□□ 1.54
SCARF1-204ENST00000570902 RGMBQ6NW40 437 aa24.68■■□□□ 1.54
SCARF1-204ENST00000570902 CCDC102AQ96A19 550 aa24.68■■□□□ 1.54
SCARF1-204ENST00000570902 DGKZQ13574 1117 aa24.67■■□□□ 1.54
SCARF1-204ENST00000570902 WDR43Q15061 677 aaKnown RBP eCLIP24.67■■□□□ 1.54
SCARF1-204ENST00000570902 DOK7Q18PE1 504 aa24.67■■□□□ 1.54
SCARF1-204ENST00000570902 TBC1D16Q8TBP0 767 aa24.67■■□□□ 1.54
SCARF1-204ENST00000570902 CFAP44Q96MT7 982 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms