RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 USPL1Q5W0Q7 1092 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 CWC25Q9NXE8 425 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 C9orf78Q9NZ63 289 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 NARFQ9UHQ1 456 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 EP400Q96L91 3159 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 ARFGEF2Q9Y6D5 1785 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 CARMIL3Q8ND23 1372 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 BCORQ6W2J9 1755 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 NEURL1BA8MQ27 555 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 G3V3G9 751 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 GPTP24298 496 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 TCIRG1Q13488 830 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 E2F4Q16254 413 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 CWF19L2Q2TBE0 894 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 PARP10Q53GL7 1025 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 BEND3Q5T5X7 828 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 ERICH6BQ5W0A0 696 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 CLEC4GQ6UXB4 293 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 EXOC6Q8TAG9 804 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 SRP68Q9UHB9 627 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 NIP7Q9Y221 180 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 TAF1LQ8IZX4 1826 aa8.26□□□□□ -1.09
CTDNEP1-204ENST00000570484 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 C2orf72A6NCS6 295 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 GRM8O00222 908 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 HSP90B1P14625 803 aaKnown RBP8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 HLFQ16534 295 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 BICDL1Q6ZP65 573 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 PPP1R42Q7Z4L9 355 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 CCDC191Q8NCU4 936 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 C4AP0C0L4 1744 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 N4BP2Q86UW6 1770 aaPredicted RBP8.25□□□□□ -1.09
CTDNEP1-204ENST00000570484 IBTKQ9P2D0 1353 aaPredicted RBP8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 FAM177BA6PVY3 158 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 GNAI2P04899 355 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 IGKV5-2P06315 115 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 DSG2Q14126 1118 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 GCKRQ14397 625 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 PPP1R15BQ5SWA1 713 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 ILDR2Q71H61 639 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 SMIM5Q71RC9 77 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 UBE3BQ7Z3V4 1068 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 AMIGO3Q86WK7 504 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 NBPF5PQ86XG9 351 aaPredicted RBP8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 MEIS3Q99687 375 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 ISCA1Q9BUE6 129 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 NYXQ9GZU5 481 aa8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 TRMT112Q9UI30 125 aaKnown RBP8.24□□□□□ -1.09
CTDNEP1-204ENST00000570484 HMMRO75330 724 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 ST5P78524 1137 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 TBC1D9BQ66K14 1250 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 COL23A1Q86Y22 540 aaPredicted RBP8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 NLGN1Q8N2Q7 840 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 CNBD1Q8NA66 436 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 TMC2Q8TDI7 906 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 UTP14AQ9BVJ6 771 aaKnown RBP8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 GTF3C3Q9Y5Q9 886 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 UBR3Q6ZT12 1888 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 UBN2Q6ZU65 1347 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 SH3TC1Q8TE82 1336 aa8.23□□□□□ -1.09
CTDNEP1-204ENST00000570484 PCCAP05165 728 aaPredicted RBP8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 GYS1P13807 737 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 RTL5Q5HYW3 569 aaPredicted RBP8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 MSL1Q68DK7 614 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 MAMSTRQ6ZN01 415 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 ZNF34Q8IZ26 560 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 CCDC136Q96JN2 1154 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 LRRFIP2Q9Y608 721 aaKnown RBP8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 ANKRD36CQ5JPF3 1778 aa8.22□□□□□ -1.09
CTDNEP1-204ENST00000570484 CACNA1FO60840 1977 aa8.21□□□□□ -1.09
CTDNEP1-204ENST00000570484 ZBTB7BO15156 539 aaPredicted RBP8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 NTSR2O95665 410 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 NFIXQ14938 502 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 R3HDM1Q15032 1099 aaKnown RBP8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 TPTE2Q6XPS3 522 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 USP44Q9H0E7 712 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 BCL2L12Q9HB09 334 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 ZBTB40Q9NUA8 1239 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 PPP4R2Q9NY27 417 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 UTYO14607 1347 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 CDHR2Q9BYE9 1310 aa8.21□□□□□ -1.1
CTDNEP1-204ENST00000570484 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
CTDNEP1-204ENST00000570484 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
CTDNEP1-204ENST00000570484 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms