RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
TRIM25-203ENST00000570473 RBM17Q96I25 401 aaKnown RBP10.4□□□□□ -0.74
TRIM25-203ENST00000570473 NAP1L3Q99457 506 aaPredicted RBP10.4□□□□□ -0.74
TRIM25-203ENST00000570473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.4□□□□□ -0.744e-8■■■□□ 15.3
TRIM25-203ENST00000570473 ZNF446Q9NWS9 450 aa10.4□□□□□ -0.74
TRIM25-203ENST00000570473 CHMP5Q9NZZ3 219 aa10.4□□□□□ -0.74
TRIM25-203ENST00000570473 MKL2Q9ULH7 1088 aa10.4□□□□□ -0.74
TRIM25-203ENST00000570473 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.39□□□□□ -0.75
TRIM25-203ENST00000570473 RPS6KA5O75582 802 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 CD53P19397 219 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 KIF4BQ2VIQ3 1234 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 CCDC122Q5T0U0 273 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 CEP135Q66GS9 1140 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 CCDC146Q8IYE0 955 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 ATP11CQ8NB49 1132 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 ZNF397Q8NF99 534 aaPredicted RBP10.39□□□□□ -0.75
TRIM25-203ENST00000570473 TRIM11Q96F44 468 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 DDX11Q96FC9 970 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 GPATCH3Q96I76 525 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 RNPC3Q96LT9 517 aaKnown RBP10.39□□□□□ -0.75
TRIM25-203ENST00000570473 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 LRRC27Q9C0I9 530 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 BATF3Q9NR55 127 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
TRIM25-203ENST00000570473 N6AMT1Q9Y5N5 214 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 SLC30A1Q9Y6M5 507 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
TRIM25-203ENST00000570473 ARHGAP31Q2M1Z3 1444 aa10.39□□□□□ -0.75
TRIM25-203ENST00000570473 ERC2O15083 957 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 ATP8B1O43520 1251 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 KDM1AO60341 852 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 MYL1P05976 194 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 CYP11B2P19099 503 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 USP11P51784 963 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 NSUN2Q08J23 767 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRIM25-203ENST00000570473 PDAP1Q13442 181 aaKnown RBP10.38□□□□□ -0.75
TRIM25-203ENST00000570473 WTAPQ15007 396 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 SAMD14Q8IZD0 417 aaPredicted RBP10.38□□□□□ -0.75
TRIM25-203ENST00000570473 GABPB2Q8TAK5 448 aaPredicted RBP10.38□□□□□ -0.75
TRIM25-203ENST00000570473 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 CDHR1Q96JP9 859 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 MAP3K14Q99558 947 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 STK31Q9BXU1 1019 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 GINM1Q9NU53 330 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 LMCD1Q9NZU5 365 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 MYO6Q9UM54 1294 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
TRIM25-203ENST00000570473 COL6A1P12109 1028 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 PSME1Q06323 249 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 DDR1Q08345 913 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 KCTD2Q14681 263 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 CCDC158Q5M9N0 1113 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 PACS1Q6VY07 963 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 MFN1Q8IWA4 741 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 FAM81AQ8TBF8 368 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 GPT2Q8TD30 523 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 LZICQ8WZA0 190 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 CENPTQ96BT3 561 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 VMP1Q96GC9 406 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 EPAS1Q99814 870 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 DUSP9Q99956 384 aaKnown RBP10.37□□□□□ -0.75
TRIM25-203ENST00000570473 RGL1Q9NZL6 768 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 SEPT10Q9P0V9 454 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
TRIM25-203ENST00000570473 ZMYM3Q14202 1370 aa10.37□□□□□ -0.75
TRIM25-203ENST00000570473 HNRNPCP07910 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM25-203ENST00000570473 RAB27AP51159 221 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 NEK2P51955 445 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 SLC8A3P57103 927 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 ZNF445P59923 1031 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 POU5F1BQ06416 359 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 COX10Q12887 443 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 MAPRE1Q15691 268 aaKnown RBP10.36□□□□□ -0.75
TRIM25-203ENST00000570473 MUM1Q2TAK8 710 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 MYSM1Q5VVJ2 828 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 RCSD1Q6JBY9 416 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 CLEC17AQ6ZS10 378 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 DAAM2Q86T65 1068 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 RNF168Q8IYW5 571 aaPredicted RBP10.36□□□□□ -0.75
TRIM25-203ENST00000570473 TRIML1Q8N9V2 468 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 KCNB2Q92953 911 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 MUC3BQ9H195 1237 aa10.36□□□□□ -0.75
TRIM25-203ENST00000570473 PPP1R1BQ9UD71 204 aaPredicted RBP10.36□□□□□ -0.75
TRIM25-203ENST00000570473 A0A087WUV0 522 aaPredicted RBP10.35□□□□□ -0.75
TRIM25-203ENST00000570473 GOLGA6L10A0A0M3HER8 536 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 ERCC5P28715 1186 aaPredicted RBP10.35□□□□□ -0.75
TRIM25-203ENST00000570473 CSE1LP55060 971 aaKnown RBP10.35□□□□□ -0.75
TRIM25-203ENST00000570473 CORO7P57737 925 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 COBLL1Q53SF7 1204 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 RRP12Q5JTH9 1297 aaKnown RBP10.35□□□□□ -0.75
TRIM25-203ENST00000570473 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
TRIM25-203ENST00000570473 APLFQ8IW19 511 aaPredicted RBP10.35□□□□□ -0.75
TRIM25-203ENST00000570473 STK11IPQ8N1F8 1099 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 ARL6IP6Q8N6S5 226 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 SMYD1Q8NB12 490 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 SVIPQ8NHG7 77 aa10.35□□□□□ -0.75
TRIM25-203ENST00000570473 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms