RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
THUMPD1-205ENST00000570231 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 MAPK8IP3Q9UPT6 1336 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 BMP1P13497 986 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 EVA1CP58658 441 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 NBPF6Q5VWK0 638 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 FOXJ1Q92949 421 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 NBPF4Q96M43 638 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 C8orf37Q96NL8 207 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 BTG4Q9NY30 223 aa9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 RRP7AQ9Y3A4 280 aaKnown RBP9.15□□□□□ -0.94
THUMPD1-205ENST00000570231 SPATA31A6Q5VVP1 1343 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 LRP6O75581 1613 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 WDR4P57081 412 aaKnown RBP9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 INSM1Q01101 510 aaPredicted RBP9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 NEUROD2Q15784 382 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 TRIM46Q7Z4K8 759 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 RUNDC1Q96C34 613 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 CDK15Q96Q40 435 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 LTN1O94822 1766 aa9.14□□□□□ -0.95
THUMPD1-205ENST00000570231 CAMTA1Q9Y6Y1 1673 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 APAF1O14727 1248 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 NEFMP07197 916 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 NR5A1Q13285 461 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 TOM1L2Q6ZVM7 507 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 FBXO41Q8TF61 875 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 POLR3EQ9NVU0 708 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 COL5A2P05997 1499 aaPredicted RBP9.13□□□□□ -0.95
THUMPD1-205ENST00000570231 RTL5Q5HYW3 569 aaPredicted RBP9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 MRPL14Q6P1L8 145 aaKnown RBP9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 TCP11L2Q8N4U5 519 aa9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 GPKOWQ92917 476 aaPredicted RBP eCLIP9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 PHACTR3Q96KR7 559 aa9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 MAP2P11137 1827 aaKnown RBP9.12□□□□□ -0.95
THUMPD1-205ENST00000570231 ABCC6O95255 1503 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 WDR17Q8IZU2 1322 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 WIPF1O43516 503 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 TIMP2P16035 220 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 DDRGK1Q96HY6 314 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 PLEKHF1Q96S99 279 aa9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
THUMPD1-205ENST00000570231 LMO7Q8WWI1 1683 aa9.1□□□□□ -0.95
THUMPD1-205ENST00000570231 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
THUMPD1-205ENST00000570231 RAPGEF4Q8WZA2 1011 aa9.1□□□□□ -0.95
THUMPD1-205ENST00000570231 COL18A1P39060 1754 aa9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 COL14A1Q05707 1796 aaKnown RBP9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 RGPD1P0DJD0 1748 aa9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 CRB1P82279 1406 aa9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 UPP2O95045 317 aa9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 TMPOP42166 694 aaKnown RBP9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 KDRP35968 1356 aa9.09□□□□□ -0.95
THUMPD1-205ENST00000570231 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 ZIC2O95409 532 aaPredicted RBP9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 RIPK4P57078 832 aa9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 SKIV2LQ15477 1246 aaKnown RBP9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 NFE2L2Q16236 605 aa9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 CARD10Q9BWT7 1032 aa9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 USP21Q9UK80 565 aa9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 MEGF6O75095 1541 aa9.08□□□□□ -0.96
THUMPD1-205ENST00000570231 AFF2P51816 1311 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 SLIT2O94813 1529 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 MAGEB6P1A0A0J9YX57 407 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 SH3D19Q5HYK7 790 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 ZNF530Q6P9A1 599 aaPredicted RBP9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 UNC5CLQ8IV45 518 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 MAP4K5Q9Y4K4 846 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 PLCH1Q4KWH8 1693 aa9.07□□□□□ -0.96
THUMPD1-205ENST00000570231 NCAPD2Q15021 1401 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 IL2RBP14784 551 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 DCTN1Q14203 1278 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 PLEKHO1Q53GL0 409 aaPredicted RBP9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 IRF7Q92985 503 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 C1QTNF2Q9BXJ5 285 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
THUMPD1-205ENST00000570231 SPATA31A1Q5TZJ5 1347 aa9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 FAM208AQ9UK61 1670 aaKnown RBP9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 CENPBP07199 599 aaPredicted RBP9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 MCM10Q7L590 875 aa9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 TRMT44Q8IYL2 757 aaKnown RBP9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 FNBP4Q8N3X1 1017 aaPredicted RBP9.05□□□□□ -0.96
THUMPD1-205ENST00000570231 PNMA1Q8ND90 353 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms