RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 RUFY3Q7L099 469 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 ZNF652Q9Y2D9 606 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 EPHA10Q5JZY3 1008 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 DNTTIP2Q5QJE6 756 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 A0A1B0GUL7 405 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 PTH1RQ03431 593 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 SYCE3A1L190 88 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 PRIM1P49642 420 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 PDIA6Q15084 440 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 MEGF6O75095 1541 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 IRS4O14654 1257 aaPredicted RBP13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 DDX11Q96FC9 970 aa13.81□□□□□ -0.2
PDXDC1-217ENST00000570001 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 SLC27A2O14975 620 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 PTPN12Q05209 780 aaKnown RBP13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 PKP1Q13835 747 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 DBNLQ9UJU6 430 aaKnown RBP13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 LTN1O94822 1766 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 XRCC6P12956 609 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 CDCA7Q9BWT1 371 aaPredicted RBP13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 TOM1O60784 492 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 CPDO75976 1380 aa13.8□□□□□ -0.2
PDXDC1-217ENST00000570001 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 DRC7Q8IY82 874 aa13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 CCDC129Q6ZRS4 1044 aa13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
PDXDC1-217ENST00000570001 SLC5A1P13866 664 aa13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 AIDAQ96BJ3 306 aa13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 ZFYP08048 801 aaPredicted RBP13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 PIGBQ92521 554 aa13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 SOS2Q07890 1332 aaPredicted RBP13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 BRF1Q92994 677 aa13.78□□□□□ -0.2
PDXDC1-217ENST00000570001 ERICH2A1L162 156 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 NBPF26B4DH59 902 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 ITGA6P23229 1130 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 KIAA2012Q0VF49 1180 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 TRIM29Q14134 588 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 TTF1Q15361 905 aaPredicted RBP13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 NBPF14Q5TI25 921 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 NBPF15Q8N660 670 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 LRRC2Q9BYS8 371 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 RGPD1P0DJD0 1748 aa13.77□□□□□ -0.2
PDXDC1-217ENST00000570001 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
PDXDC1-217ENST00000570001 LRRC24Q50LG9 513 aa13.77□□□□□ -0.21
PDXDC1-217ENST00000570001 SPATA32Q96LK8 384 aa13.77□□□□□ -0.21
PDXDC1-217ENST00000570001 PANK2Q9BZ23 570 aa13.77□□□□□ -0.21
PDXDC1-217ENST00000570001 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.21
PDXDC1-217ENST00000570001 H7C1W4 665 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 SYT1P21579 422 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 HAND2P61296 217 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 ZNF213O14771 459 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 Q6ZUG5 572 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 SLIT3O75094 1523 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 F13A1P00488 732 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 HAUS7Q99871 368 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 NACAP1Q9BZK3 213 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 LRP2BPQ9P2M1 347 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 NWD1Q149M9 1564 aa13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 NIP7Q9Y221 180 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDXDC1-217ENST00000570001 BRD1O95696 1058 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 RPS6KB1P23443 525 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 RRP12Q5JTH9 1297 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 MAP3K15Q6ZN16 1313 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 ZNF142P52746 1687 aaPredicted RBP13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 VIRMAQ69YN4 1812 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 MAP3K12Q12852 859 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 CCDC73Q6ZRK6 1079 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms