RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 UBTFL1P0CB47 393 aaPredicted RBP12.73□□□□□ -0.37
PKM-221ENST00000568743 MS4A1P11836 297 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
PKM-221ENST00000568743 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
PKM-221ENST00000568743 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 PLA2G12BQ9BX93 195 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 GREM2Q9H772 168 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
PKM-221ENST00000568743 LAMB2P55268 1798 aa12.73□□□□□ -0.37
PKM-221ENST00000568743 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
PKM-221ENST00000568743 GPR162Q16538 588 aa12.72□□□□□ -0.37
PKM-221ENST00000568743 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
PKM-221ENST00000568743 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
PKM-221ENST00000568743 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
PKM-221ENST00000568743 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
PKM-221ENST00000568743 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
PKM-221ENST00000568743 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
PKM-221ENST00000568743 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
PKM-221ENST00000568743 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
PKM-221ENST00000568743 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
PKM-221ENST00000568743 COL4A1P02462 1669 aa12.71□□□□□ -0.37
PKM-221ENST00000568743 GNAI3P08754 354 aa12.71□□□□□ -0.37
PKM-221ENST00000568743 PDE3AQ14432 1141 aa12.71□□□□□ -0.37
PKM-221ENST00000568743 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
PKM-221ENST00000568743 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
PKM-221ENST00000568743 ANKRD44Q8N8A2 993 aa12.71□□□□□ -0.37
PKM-221ENST00000568743 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
PKM-221ENST00000568743 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
PKM-221ENST00000568743 GOLGB1Q14789 3259 aaKnown RBP12.7□□□□□ -0.38
PKM-221ENST00000568743 PPEF1O14829 653 aaPredicted RBP12.7□□□□□ -0.38
PKM-221ENST00000568743 C21orf2O43822 256 aa12.7□□□□□ -0.38
PKM-221ENST00000568743 CSF1RP07333 972 aa12.7□□□□□ -0.38
PKM-221ENST00000568743 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
PKM-221ENST00000568743 GRAPQ13588 217 aa12.7□□□□□ -0.38
PKM-221ENST00000568743 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
PKM-221ENST00000568743 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
PKM-221ENST00000568743 DLEC1Q9Y238 1755 aa12.7□□□□□ -0.38
PKM-221ENST00000568743 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
PKM-221ENST00000568743 ITGA6P23229 1130 aa12.69□□□□□ -0.38
PKM-221ENST00000568743 BRCA1P38398 1863 aaKnown RBP12.68□□□□□ -0.38
PKM-221ENST00000568743 GNAI2P04899 355 aa12.68□□□□□ -0.38
PKM-221ENST00000568743 RABL6Q3YEC7 729 aaPredicted RBP12.68□□□□□ -0.38
PKM-221ENST00000568743 ZNF594Q96JF6 807 aaPredicted RBP12.68□□□□□ -0.38
PKM-221ENST00000568743 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
PKM-221ENST00000568743 SLX4Q8IY92 1834 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
PKM-221ENST00000568743 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
PKM-221ENST00000568743 IFIT5Q13325 482 aaKnown RBP12.67□□□□□ -0.38
PKM-221ENST00000568743 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 C7orf43Q8WVR3 580 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
PKM-221ENST00000568743 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 TAF1P21675 1872 aa12.67□□□□□ -0.38
PKM-221ENST00000568743 BBOX1O75936 387 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 CCDC57Q2TAC2 916 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
PKM-221ENST00000568743 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
PKM-221ENST00000568743 MYH3P11055 1940 aa12.65□□□□□ -0.38
PKM-221ENST00000568743 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
PKM-221ENST00000568743 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.38
PKM-221ENST00000568743 RASSF7Q02833 373 aa12.65□□□□□ -0.38
PKM-221ENST00000568743 CCDC93Q567U6 631 aa12.65□□□□□ -0.38
PKM-221ENST00000568743 ZBTB40Q9NUA8 1239 aa12.65□□□□□ -0.38
PKM-221ENST00000568743 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
PKM-221ENST00000568743 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
PKM-221ENST00000568743 CENPBP07199 599 aaPredicted RBP12.64□□□□□ -0.39
PKM-221ENST00000568743 RFX5P48382 616 aaPredicted RBP12.64□□□□□ -0.39
PKM-221ENST00000568743 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
PKM-221ENST00000568743 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
PKM-221ENST00000568743 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
PKM-221ENST00000568743 NFKBIEO00221 500 aa12.63□□□□□ -0.39
PKM-221ENST00000568743 GRIN3BO60391 1043 aa12.63□□□□□ -0.39
PKM-221ENST00000568743 GPSM2P81274 684 aa12.63□□□□□ -0.39
PKM-221ENST00000568743 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
PKM-221ENST00000568743 TMC4Q7Z404 712 aa12.63□□□□□ -0.39
PKM-221ENST00000568743 SIL1Q9H173 461 aa12.63□□□□□ -0.39
PKM-221ENST00000568743 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
PKM-221ENST00000568743 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
PKM-221ENST00000568743 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
PKM-221ENST00000568743 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
PKM-221ENST00000568743 MTX1Q13505 466 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 LRRC24Q50LG9 513 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 SOGA3Q5TF21 947 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 RTKN2Q8IZC4 609 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 EXOC6Q8TAG9 804 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 CNNM1Q9NRU3 951 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 MINPP1Q9UNW1 487 aa12.62□□□□□ -0.39
PKM-221ENST00000568743 NSFL1CQ9UNZ2 370 aaKnown RBP12.62□□□□□ -0.39
PKM-221ENST00000568743 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms