RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 PNMA6FA0A0J9YX94 578 aa9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 TNFRSF10AO00220 468 aa9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 SORBS3O60504 671 aa9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 NBPF10Q6P3W6 841 aaKnown RBP9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 TTC16Q8NEE8 873 aa9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 HPS1Q92902 700 aa9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 NUDT16Q96DE0 195 aaKnown RBP9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 CSRNP1Q96S65 589 aa9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 DMGDHQ9UI17 866 aaKnown RBP9.96□□□□□ -0.82
HERPUD1-214ENST00000568651 ZC3H6P61129 1189 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-214ENST00000568651 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
HERPUD1-214ENST00000568651 SUSD3Q96L08 255 aa9.95□□□□□ -0.82
HERPUD1-214ENST00000568651 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
HERPUD1-214ENST00000568651 METTL5Q9NRN9 209 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-214ENST00000568651 ATP10BO94823 1461 aa9.95□□□□□ -0.82
HERPUD1-214ENST00000568651 GOLGA3Q08378 1498 aa9.94□□□□□ -0.82
HERPUD1-214ENST00000568651 CAPN5O15484 640 aaPredicted RBP9.94□□□□□ -0.82
HERPUD1-214ENST00000568651 GNA15P30679 374 aa9.94□□□□□ -0.82
HERPUD1-214ENST00000568651 PSMD2Q13200 908 aa9.94□□□□□ -0.82
HERPUD1-214ENST00000568651 XKR5Q6UX68 686 aa9.94□□□□□ -0.82
HERPUD1-214ENST00000568651 GPR152Q8TDT2 470 aa9.94□□□□□ -0.82
HERPUD1-214ENST00000568651 PHLDB1Q86UU1 1377 aa9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 ATP4AP20648 1035 aa9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 CTSOP43234 321 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 FAM9AQ8IZU1 332 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 RNF217Q8TC41 542 aa9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 C11orf16Q9NQ32 467 aa9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 FNDC3AQ9Y2H6 1198 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-214ENST00000568651 A0A1B0GTH6 734 aa9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 OPLAHO14841 1288 aa9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 ARSDP51689 593 aa9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 PDE12Q6L8Q7 609 aaKnown RBP9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 AIDAQ96BJ3 306 aa9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 WWC3Q9ULE0 1092 aa9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 BCORL1Q5H9F3 1711 aa9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 RIMS1Q86UR5 1692 aaKnown RBP9.92□□□□□ -0.82
HERPUD1-214ENST00000568651 EIF1AYO14602 144 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 INPP5BP32019 993 aa9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 CEBPAP49715 358 aaPredicted RBP9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 IDH3AP50213 366 aa9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 LYSMD3Q7Z3D4 306 aa9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 CFHR5Q9BXR6 569 aa9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 GGNBP2Q9H3C7 697 aa9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 NEO1Q92859 1461 aa9.91□□□□□ -0.82
HERPUD1-214ENST00000568651 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
HERPUD1-214ENST00000568651 CPNE3O75131 537 aaKnown RBP9.9□□□□□ -0.82
HERPUD1-214ENST00000568651 VTI1BQ9UEU0 232 aa9.9□□□□□ -0.82
HERPUD1-214ENST00000568651 SPG7Q9UQ90 795 aa9.9□□□□□ -0.82
HERPUD1-214ENST00000568651 GIPC1O14908 333 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 BMP2P12643 396 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 HDLBPQ00341 1268 aaKnown RBP9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 C8orf34Q49A92 452 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 BICDL1Q6ZP65 573 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 BTLAQ7Z6A9 289 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 SNX29Q8TEQ0 813 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 AK5Q9Y6K8 562 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 DENND4BO75064 1496 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 YEATS2Q9ULM3 1422 aa9.89□□□□□ -0.83
HERPUD1-214ENST00000568651 EPB42P16452 691 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 PHKA2P46019 1235 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 POU4F2Q12837 409 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 ORC1Q13415 861 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 MRPL14Q6P1L8 145 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 ZNF280CQ8ND82 737 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 SREK1Q8WXA9 508 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 CRELD1Q96HD1 420 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 FAM161BQ96MY7 647 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 ZIC5Q96T25 663 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 NEUROD4Q9HD90 331 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 USP35Q9P2H5 1018 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 POGZQ7Z3K3 1410 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 AKNAQ7Z591 1439 aa9.88□□□□□ -0.83
HERPUD1-214ENST00000568651 RGS20O76081 388 aa9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 ERCC5P28715 1186 aaPredicted RBP9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 HSH2DQ96JZ2 352 aa9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 SETDB2Q96T68 719 aa9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
HERPUD1-214ENST00000568651 ABCA9Q8IUA7 1624 aa9.86□□□□□ -0.83
HERPUD1-214ENST00000568651 TNFRSF21O75509 655 aa9.86□□□□□ -0.83
HERPUD1-214ENST00000568651 AVPP01185 164 aa9.86□□□□□ -0.83
HERPUD1-214ENST00000568651 MSX1P28360 303 aa9.86□□□□□ -0.83
HERPUD1-214ENST00000568651 FANCCQ00597 558 aa9.86□□□□□ -0.83
HERPUD1-214ENST00000568651 METTL16Q86W50 562 aaKnown RBP9.86□□□□□ -0.83
HERPUD1-214ENST00000568651 FANCAO15360 1455 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 SPATA31D1Q6ZQQ2 1576 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 PLEKHD1A6NEE1 506 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 TTLL8A6PVC2 850 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 EGFRP00533 1210 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 SCARF1Q14162 830 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 ARSJQ5FYB0 599 aaPredicted RBP9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 RNF34Q969K3 372 aa9.85□□□□□ -0.83
HERPUD1-214ENST00000568651 KCNMB2Q9Y691 235 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms