RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
VAC14-210ENST00000568548 NR1I2O75469 434 aa20.34■□□□□ 0.85
VAC14-210ENST00000568548 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
VAC14-210ENST00000568548 CCDC186Q7Z3E2 898 aa20.34■□□□□ 0.85
VAC14-210ENST00000568548 SPATA32Q96LK8 384 aa20.34■□□□□ 0.85
VAC14-210ENST00000568548 NUP62CLQ9H1M0 184 aa20.34■□□□□ 0.85
VAC14-210ENST00000568548 RNMTO43148 476 aaKnown RBP20.33■□□□□ 0.85
VAC14-210ENST00000568548 CCDC192P0DO97 292 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 KRT85P78386 507 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 FGD1P98174 961 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 TYRO3Q06418 890 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 PPP4R3BQ5MIZ7 849 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 MAP7D2Q96T17 732 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 TNMDQ9H2S6 317 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 MED1Q15648 1581 aaPredicted RBP20.33■□□□□ 0.85
VAC14-210ENST00000568548 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 A0A0G2JLW4 131 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 NAA30Q147X3 362 aaPredicted RBP20.33■□□□□ 0.85
VAC14-210ENST00000568548 MYD88Q99836 296 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 DNAJC25Q9H1X3 360 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 RGPD5Q99666 1765 aa20.33■□□□□ 0.85
VAC14-210ENST00000568548 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.84
VAC14-210ENST00000568548 UVSSAQ2YD98 709 aa20.33■□□□□ 0.84
VAC14-210ENST00000568548 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.84
VAC14-210ENST00000568548 C16orf45Q96MC5 204 aaPredicted RBP20.33■□□□□ 0.84
VAC14-210ENST00000568548 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
VAC14-210ENST00000568548 TRIM5Q9C035 493 aa20.32■□□□□ 0.84
VAC14-210ENST00000568548 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
VAC14-210ENST00000568548 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
VAC14-210ENST00000568548 TOB2Q14106 344 aaPredicted RBP20.32■□□□□ 0.84
VAC14-210ENST00000568548 MAP3K11Q16584 847 aa20.32■□□□□ 0.84
VAC14-210ENST00000568548 KIF3AQ9Y496 699 aa20.32■□□□□ 0.84
VAC14-210ENST00000568548 ERBB3P21860 1342 aa20.31■□□□□ 0.84
VAC14-210ENST00000568548 ZNF592Q92610 1267 aa20.31■□□□□ 0.84
VAC14-210ENST00000568548 RIOK3O14730 519 aaKnown RBP20.31■□□□□ 0.84
VAC14-210ENST00000568548 ARID5BQ14865 1188 aa20.31■□□□□ 0.84
VAC14-210ENST00000568548 PXDNQ92626 1479 aa20.31■□□□□ 0.84
VAC14-210ENST00000568548 CCT2P78371 535 aaKnown RBP20.3■□□□□ 0.84
VAC14-210ENST00000568548 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 BCL2L12Q9HB09 334 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 CBX8Q9HC52 389 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 FAM208AQ9UK61 1670 aaKnown RBP20.3■□□□□ 0.84
VAC14-210ENST00000568548 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 IL17RAQ96F46 866 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
VAC14-210ENST00000568548 USP16Q9Y5T5 823 aa20.3■□□□□ 0.84
VAC14-210ENST00000568548 LETM1O95202 739 aaPredicted RBP20.29■□□□□ 0.84
VAC14-210ENST00000568548 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 KIAA1524Q8TCG1 905 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 ZSCAN31Q96LW9 406 aaPredicted RBP20.29■□□□□ 0.84
VAC14-210ENST00000568548 NLRP2Q9NX02 1062 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 TFCP2Q12800 502 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 BRF1Q92994 677 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 PGBD1Q96JS3 809 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
VAC14-210ENST00000568548 UBE3BQ7Z3V4 1068 aa20.28■□□□□ 0.84
VAC14-210ENST00000568548 H3BQV1 296 aa20.28■□□□□ 0.84
VAC14-210ENST00000568548 ATP2B3Q16720 1220 aa20.28■□□□□ 0.84
VAC14-210ENST00000568548 IFFO2Q5TF58 517 aa20.28■□□□□ 0.84
VAC14-210ENST00000568548 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
VAC14-210ENST00000568548 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
VAC14-210ENST00000568548 Q6ZUG5 572 aa20.27■□□□□ 0.84
VAC14-210ENST00000568548 LEO1Q8WVC0 666 aaPredicted RBP20.27■□□□□ 0.84
VAC14-210ENST00000568548 CHAF1AQ13111 956 aaPredicted RBP20.27■□□□□ 0.84
VAC14-210ENST00000568548 CHRNA2Q15822 529 aa20.27■□□□□ 0.84
VAC14-210ENST00000568548 NEUROD6Q96NK8 337 aa20.27■□□□□ 0.84
VAC14-210ENST00000568548 DBNLQ9UJU6 430 aaKnown RBP20.27■□□□□ 0.84
VAC14-210ENST00000568548 DBNDD2Q9BQY9 259 aa20.26■□□□□ 0.83
VAC14-210ENST00000568548 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
VAC14-210ENST00000568548 TNS3Q68CZ2 1445 aa20.26■□□□□ 0.83
VAC14-210ENST00000568548 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.831e-7■■■■□ 25.6
VAC14-210ENST00000568548 LINS1Q8NG48 757 aa20.26■□□□□ 0.83
VAC14-210ENST00000568548 FAM200AQ8TCP9 573 aa20.26■□□□□ 0.83
VAC14-210ENST00000568548 SYTL4Q96C24 671 aaPredicted RBP20.26■□□□□ 0.83
VAC14-210ENST00000568548 CCDC94Q9BW85 323 aaPredicted RBP20.26■□□□□ 0.83
VAC14-210ENST00000568548 CSB-PGBD3P0DP91 1061 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 COL15A1P39059 1388 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 TAF5LO75529 589 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 PSMA5P28066 241 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 ERC1Q8IUD2 1116 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 SPATA31A3Q5VYP0 1347 aa20.25■□□□□ 0.83
VAC14-210ENST00000568548 CAMTA1Q9Y6Y1 1673 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 ZNF165P49910 485 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 BRINP3Q76B58 766 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 CCDC85AQ96PX6 553 aaPredicted RBP20.24■□□□□ 0.83
VAC14-210ENST00000568548 TM6SF1Q9BZW5 370 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.24■□□□□ 0.83
VAC14-210ENST00000568548 V9GYY5 206 aaPredicted RBP20.24■□□□□ 0.83
VAC14-210ENST00000568548 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 XIRP1Q702N8 1843 aaKnown RBP20.24■□□□□ 0.83
VAC14-210ENST00000568548 HMGN5P82970 282 aaKnown RBP20.24■□□□□ 0.83
VAC14-210ENST00000568548 MTX1Q13505 466 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 PDIA6Q15084 440 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 OTUD7BQ6GQQ9 843 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 PRDM4Q9UKN5 801 aa20.24■□□□□ 0.83
VAC14-210ENST00000568548 KDM3BQ7LBC6 1761 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms