RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 SUPT20HQ8NEM7 779 aa16.6■□□□□ 0.25
TSC2-220ENST00000568238 PHAXQ9H814 394 aaKnown RBP16.6■□□□□ 0.25
TSC2-220ENST00000568238 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
TSC2-220ENST00000568238 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
TSC2-220ENST00000568238 EPHX2P34913 555 aa16.59■□□□□ 0.25
TSC2-220ENST00000568238 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
TSC2-220ENST00000568238 TMC4Q7Z404 712 aa16.59■□□□□ 0.25
TSC2-220ENST00000568238 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
TSC2-220ENST00000568238 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
TSC2-220ENST00000568238 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
TSC2-220ENST00000568238 VPS33BQ9H267 617 aa16.59■□□□□ 0.25
TSC2-220ENST00000568238 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
TSC2-220ENST00000568238 MYH3P11055 1940 aa16.58■□□□□ 0.25
TSC2-220ENST00000568238 CACNA1FO60840 1977 aa16.58■□□□□ 0.25
TSC2-220ENST00000568238 AOC3Q16853 763 aa16.58■□□□□ 0.24
TSC2-220ENST00000568238 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
TSC2-220ENST00000568238 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
TSC2-220ENST00000568238 RTFDC1Q9BY42 306 aaPredicted RBP16.58■□□□□ 0.24
TSC2-220ENST00000568238 IL16Q14005 1332 aa16.58■□□□□ 0.24
TSC2-220ENST00000568238 COL4A1P02462 1669 aa16.58■□□□□ 0.24
TSC2-220ENST00000568238 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
TSC2-220ENST00000568238 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
TSC2-220ENST00000568238 SF3B3Q15393 1217 aaKnown RBP16.57■□□□□ 0.24
TSC2-220ENST00000568238 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
TSC2-220ENST00000568238 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
TSC2-220ENST00000568238 MPNDQ8N594 471 aa16.57■□□□□ 0.24
TSC2-220ENST00000568238 JMYQ8N9B5 988 aa16.57■□□□□ 0.24
TSC2-220ENST00000568238 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
TSC2-220ENST00000568238 MYD88Q99836 296 aa16.57■□□□□ 0.24
TSC2-220ENST00000568238 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
TSC2-220ENST00000568238 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
TSC2-220ENST00000568238 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
TSC2-220ENST00000568238 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
TSC2-220ENST00000568238 PASKQ96RG2 1323 aa16.55■□□□□ 0.24
TSC2-220ENST00000568238 SCNN1DP51172 638 aa16.55■□□□□ 0.24
TSC2-220ENST00000568238 KIAA2012Q0VF49 1180 aa16.55■□□□□ 0.24
TSC2-220ENST00000568238 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
TSC2-220ENST00000568238 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
TSC2-220ENST00000568238 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
TSC2-220ENST00000568238 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
TSC2-220ENST00000568238 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
TSC2-220ENST00000568238 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
TSC2-220ENST00000568238 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
TSC2-220ENST00000568238 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
TSC2-220ENST00000568238 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
TSC2-220ENST00000568238 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
TSC2-220ENST00000568238 CXCL9Q07325 125 aa16.52■□□□□ 0.24
TSC2-220ENST00000568238 KSR2Q6VAB6 950 aa16.52■□□□□ 0.24
TSC2-220ENST00000568238 TRPM7Q96QT4 1865 aa16.51■□□□□ 0.23
TSC2-220ENST00000568238 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
TSC2-220ENST00000568238 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
TSC2-220ENST00000568238 EPS15P42566 896 aa16.51■□□□□ 0.23
TSC2-220ENST00000568238 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
TSC2-220ENST00000568238 CCDC152Q4G0S7 254 aa16.51■□□□□ 0.23
TSC2-220ENST00000568238 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
TSC2-220ENST00000568238 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
TSC2-220ENST00000568238 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
TSC2-220ENST00000568238 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
TSC2-220ENST00000568238 PDE8AO60658 829 aa16.5■□□□□ 0.23
TSC2-220ENST00000568238 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
TSC2-220ENST00000568238 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
TSC2-220ENST00000568238 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
TSC2-220ENST00000568238 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
TSC2-220ENST00000568238 CNTROBQ8N137 903 aa16.5■□□□□ 0.23
TSC2-220ENST00000568238 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
TSC2-220ENST00000568238 TMEM88BA6NKF7 163 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 RAD17O75943 681 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 IGKV5-2P06315 115 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 GMPSP49915 693 aaPredicted RBP16.49■□□□□ 0.23
TSC2-220ENST00000568238 GPSM2P81274 684 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 TNIP1Q15025 636 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
TSC2-220ENST00000568238 SEC31BQ9NQW1 1179 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 ADARB2Q9NS39 739 aaKnown RBP16.49■□□□□ 0.23
TSC2-220ENST00000568238 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
TSC2-220ENST00000568238 CNTNAP1P78357 1384 aa16.49■□□□□ 0.23
TSC2-220ENST00000568238 YDJCA8MPS7 323 aa16.48■□□□□ 0.23
TSC2-220ENST00000568238 C6orf229H3BNL8 230 aa16.48■□□□□ 0.23
TSC2-220ENST00000568238 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
TSC2-220ENST00000568238 G2E3Q7L622 706 aa16.48■□□□□ 0.23
TSC2-220ENST00000568238 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
TSC2-220ENST00000568238 EYA3Q99504 573 aa16.48■□□□□ 0.23
TSC2-220ENST00000568238 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
TSC2-220ENST00000568238 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
TSC2-220ENST00000568238 PSME4Q14997 1843 aa16.47■□□□□ 0.23
TSC2-220ENST00000568238 CTSWP56202 376 aa16.47■□□□□ 0.23
TSC2-220ENST00000568238 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
TSC2-220ENST00000568238 FLIIQ13045 1269 aa16.47■□□□□ 0.23
TSC2-220ENST00000568238 IFFO2Q5TF58 517 aa16.47■□□□□ 0.23
TSC2-220ENST00000568238 BCL2L13Q9BXK5 485 aa16.47■□□□□ 0.23
TSC2-220ENST00000568238 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
TSC2-220ENST00000568238 CWF19L2Q2TBE0 894 aaKnown RBP16.46■□□□□ 0.23
TSC2-220ENST00000568238 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
TSC2-220ENST00000568238 DBNDD1Q9H9R9 158 aa16.46■□□□□ 0.23
TSC2-220ENST00000568238 ANKIB1Q9P2G1 1089 aa16.46■□□□□ 0.23
TSC2-220ENST00000568238 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
TSC2-220ENST00000568238 UFL1O94874 794 aa16.45■□□□□ 0.22
TSC2-220ENST00000568238 HSPA1AP0DMV8 641 aaKnown RBP16.45■□□□□ 0.22
TSC2-220ENST00000568238 HSPA1BP0DMV9 641 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms