RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FIGNL2A6NMB9 653 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 ZBTB7BO15156 539 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-218ENST00000568153 GNRH1P01148 92 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 VEGFBP49765 207 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.23□□□□□ -1.09
CAPN3-218ENST00000568153 TRIM50Q86XT4 487 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 PNISRQ8TF01 805 aaKnown RBP8.23□□□□□ -1.09
CAPN3-218ENST00000568153 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-218ENST00000568153 TERF2IPQ9NYB0 399 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
CAPN3-218ENST00000568153 BRD4O60885 1362 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-218ENST00000568153 IQGAP1P46940 1657 aa8.22□□□□□ -1.09
CAPN3-218ENST00000568153 A0A1W2PRU2 124 aa8.22□□□□□ -1.09
CAPN3-218ENST00000568153 WASLO00401 505 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-218ENST00000568153 SCNN1DP51172 638 aa8.22□□□□□ -1.09
CAPN3-218ENST00000568153 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-218ENST00000568153 ETNK1Q9HBU6 452 aa8.22□□□□□ -1.09
CAPN3-218ENST00000568153 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
CAPN3-218ENST00000568153 RASA1P20936 1047 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 HNRNPUQ00839 825 aaKnown RBP eCLIP8.21□□□□□ -1.1
CAPN3-218ENST00000568153 PSME1Q06323 249 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 HDGFL2Q7Z4V5 671 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-218ENST00000568153 PBXIP1Q96AQ6 731 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-218ENST00000568153 DNAAF2Q9NVR5 837 aaKnown RBP8.21□□□□□ -1.1
CAPN3-218ENST00000568153 CABP1Q9NZU7 370 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 ATAD2Q6PL18 1390 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 PARD3Q8TEW0 1356 aa8.21□□□□□ -1.1
CAPN3-218ENST00000568153 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 TMEM229AB2RXF0 380 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L21D6R901 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 DKK1O94907 266 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 IL2RAP01589 272 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 PPP2R1AP30153 589 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 RNF144AP50876 292 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-218ENST00000568153 GDF10P55107 478 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 PTSQ03393 145 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 PTK7Q13308 1070 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 MORC1Q86VD1 984 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
CAPN3-218ENST00000568153 CGNL1Q0VF96 1302 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 NINLQ9Y2I6 1382 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 FAM135BQ49AJ0 1406 aa8.2□□□□□ -1.1
CAPN3-218ENST00000568153 ARHGAP23Q9P227 1491 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 MEN1O00255 615 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 PPFIA3O75145 1194 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 CLN3Q13286 438 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 CCDC102BQ68D86 513 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 LARP1Q6PKG0 1096 aaKnown RBP8.19□□□□□ -1.1
CAPN3-218ENST00000568153 SIX5Q8N196 739 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 TPCN2Q8NHX9 752 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 SLC16A10Q8TF71 515 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 CNKSR1Q969H4 720 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 PLEKHH1Q9ULM0 1364 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 ADAMTS13Q76LX8 1427 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 PTPRMP28827 1452 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 SLIT1O75093 1534 aa8.19□□□□□ -1.1
CAPN3-218ENST00000568153 POLR1AO95602 1720 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-218ENST00000568153 WIPF1O43516 503 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 INHAP05111 366 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 VSIG8P0DPA2 414 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 GPC1P35052 558 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
CAPN3-218ENST00000568153 HRH3Q9Y5N1 445 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 DLC1Q96QB1 1528 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 C3P01024 1663 aa8.18□□□□□ -1.1
CAPN3-218ENST00000568153 KDM5AP29375 1690 aaKnown RBP8.18□□□□□ -1.1
CAPN3-218ENST00000568153 SENP3-EIF4A1A0A087X0R7 540 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 IRF7Q92985 503 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 XAGE2Q96GT9 111 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 ARXQ96QS3 562 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 ESYT1Q9BSJ8 1104 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 ZNF358Q9NW07 568 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 ANKRD36BQ8N2N9 1353 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 ROBO2Q9HCK4 1378 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 MED14O60244 1454 aa8.17□□□□□ -1.1
CAPN3-218ENST00000568153 FER1L4A9Z1Z3 1794 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 TECPR2O15040 1411 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 ATG7O95352 703 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 DPYDQ12882 1025 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 ANKMY2Q8IV38 441 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms