RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SND1Q7KZF4 910 aaKnown RBP eCLIP7.18□□□□□ -1.26
HERPUD1-212ENST00000567944 BHMTQ93088 406 aa7.18□□□□□ -1.26
HERPUD1-212ENST00000567944 GZF1Q9H116 711 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-212ENST00000567944 FAM13BQ9NYF5 915 aa7.18□□□□□ -1.26
HERPUD1-212ENST00000567944 NEURL1BA8MQ27 555 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 SIN3BO75182 1162 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 MAP3K6O95382 1288 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 CELA2BP08218 269 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 XKR5Q6UX68 686 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 KRT25Q7Z3Z0 450 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 SVOPQ8N4V2 548 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 BIN2Q9UBW5 565 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 PRR12Q9ULL5 1215 aa7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 NSFL1CQ9UNZ2 370 aaKnown RBP7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-212ENST00000567944 ZBTB42B2RXF5 422 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 ADH6P28332 368 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 AAMPQ13685 434 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 SLCO4C1Q6ZQN7 724 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 NLRP13Q86W25 1043 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 TNFRSF25Q93038 417 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 FAM129BQ96TA1 746 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 EFCC1Q9HA90 598 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 BRPF3Q9ULD4 1205 aa7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-212ENST00000567944 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 SHISA8B8ZZ34 492 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 OIP5O43482 229 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 MMP20O60882 483 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 ARHGEF15O94989 841 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 IGHA1P01876 353 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 EPXP11678 715 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 GOLGA6L1Q8N7Z2 621 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 RBCK1Q9BYM8 510 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 ELP3Q9H9T3 547 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 CNTN3Q9P232 1028 aa7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 GDF2Q9UK05 429 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-212ENST00000567944 RARAP10276 462 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 BCRP11274 1271 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 USP5P45974 858 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 PDE12Q6L8Q7 609 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 TMC7Q7Z402 723 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 CHRDQ9H2X0 955 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 TLR7Q9NYK1 1049 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 DCTN4Q9UJW0 460 aa7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 FNDC3AQ9Y2H6 1198 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-212ENST00000567944 GPR182O15218 404 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 NDUFB5O43674 189 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 CYP2E1P05181 493 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 RPLP1P05386 114 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 HOXD8P13378 290 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 HOXB4P17483 251 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 COL13A1Q5TAT6 717 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 DHX32Q7L7V1 743 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 TRPM4Q8TD43 1214 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 PNMA5Q96PV4 448 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 CITED4Q96RK1 184 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 LRRC4BQ9NT99 713 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
HERPUD1-212ENST00000567944 TNFRSF21O75509 655 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 PCSK2P16519 638 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 MARSP56192 900 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 ZNF438Q7Z4V0 828 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 GALNT6Q8NCL4 622 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 OR13H1Q8NG92 308 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 EDARADDQ8WWZ3 215 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 ABI2Q9NYB9 513 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 FOXD3Q9UJU5 478 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 NAGPAQ9UK23 515 aa7.12□□□□□ -1.27
HERPUD1-212ENST00000567944 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 DSC3Q14574 896 aa7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 DNAJC14Q6Y2X3 702 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
HERPUD1-212ENST00000567944 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 MAPK1P28482 360 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 SOX18P35713 384 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 ADH7P40394 386 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 NRLP54845 237 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 GPLD1P80108 840 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 EHHADHQ08426 723 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 BTBD6Q96KE9 485 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 SLC6A14Q9UN76 642 aa7.1□□□□□ -1.27
HERPUD1-212ENST00000567944 MLLT1Q03111 559 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 ORC1Q13415 861 aa7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 KANK3Q6NY19 840 aa7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 ALKBH8Q96BT7 664 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 ASB16Q96NS5 453 aa7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-212ENST00000567944 J3QW42 95 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 EREGO14944 169 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 TREHO43280 583 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms