RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 REM2Q8IYK8 340 aaPredicted RBP18.55■□□□□ 0.56
SMG1-213ENST00000567737 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
SMG1-213ENST00000567737 NBPF26B4DH59 902 aa18.54■□□□□ 0.56
SMG1-213ENST00000567737 SLC10A3P09131 477 aa18.54■□□□□ 0.56
SMG1-213ENST00000567737 NBPF10Q6P3W6 841 aaKnown RBP18.54■□□□□ 0.56
SMG1-213ENST00000567737 KRT26Q7Z3Y9 468 aa18.54■□□□□ 0.56
SMG1-213ENST00000567737 AKAP11Q9UKA4 1901 aa18.54■□□□□ 0.56
SMG1-213ENST00000567737 CEMIPQ8WUJ3 1361 aa18.54■□□□□ 0.56
SMG1-213ENST00000567737 MICALL2Q8IY33 904 aa18.53■□□□□ 0.56
SMG1-213ENST00000567737 ATP6V0A2Q9Y487 856 aa18.53■□□□□ 0.56
SMG1-213ENST00000567737 SHTN1A0MZ66 631 aa18.52■□□□□ 0.56
SMG1-213ENST00000567737 RTFDC1Q9BY42 306 aaPredicted RBP18.52■□□□□ 0.56
SMG1-213ENST00000567737 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
SMG1-213ENST00000567737 DCPSQ96C86 337 aaKnown RBP18.51■□□□□ 0.55
SMG1-213ENST00000567737 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
SMG1-213ENST00000567737 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
SMG1-213ENST00000567737 ERVV-1B6SEH8 477 aa18.49■□□□□ 0.55
SMG1-213ENST00000567737 ADM5C9JUS6 153 aa18.49■□□□□ 0.55
SMG1-213ENST00000567737 FBXO46Q6PJ61 603 aaPredicted RBP18.49■□□□□ 0.55
SMG1-213ENST00000567737 SAMD7Q7Z3H4 446 aa18.49■□□□□ 0.55
SMG1-213ENST00000567737 MPNDQ8N594 471 aa18.49■□□□□ 0.55
SMG1-213ENST00000567737 ZNF296Q8WUU4 475 aaPredicted RBP18.49■□□□□ 0.55
SMG1-213ENST00000567737 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
SMG1-213ENST00000567737 GPTP24298 496 aa18.48■□□□□ 0.55
SMG1-213ENST00000567737 FXR1P51114 621 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMG1-213ENST00000567737 NGEFQ8N5V2 710 aa18.48■□□□□ 0.55
SMG1-213ENST00000567737 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
SMG1-213ENST00000567737 TBC1D10BQ4KMP7 808 aaPredicted RBP18.47■□□□□ 0.55
SMG1-213ENST00000567737 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
SMG1-213ENST00000567737 KIF6Q6ZMV9 814 aa18.47■□□□□ 0.55
SMG1-213ENST00000567737 DPF2Q92785 391 aa18.47■□□□□ 0.55
SMG1-213ENST00000567737 MAP3K15Q6ZN16 1313 aa18.47■□□□□ 0.55
SMG1-213ENST00000567737 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
SMG1-213ENST00000567737 C3orf67Q6ZVT6 689 aa18.46■□□□□ 0.55
SMG1-213ENST00000567737 RASAL3Q86YV0 1011 aa18.46■□□□□ 0.55
SMG1-213ENST00000567737 ABCC4O15439 1325 aa18.46■□□□□ 0.55
SMG1-213ENST00000567737 YDJCA8MPS7 323 aa18.45■□□□□ 0.54
SMG1-213ENST00000567737 TBC1D8O95759 1140 aa18.45■□□□□ 0.54
SMG1-213ENST00000567737 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
SMG1-213ENST00000567737 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
SMG1-213ENST00000567737 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
SMG1-213ENST00000567737 SP8Q8IXZ3 490 aa18.45■□□□□ 0.54
SMG1-213ENST00000567737 SSUH2Q9Y2M2 353 aa18.45■□□□□ 0.54
SMG1-213ENST00000567737 NTSR2O95665 410 aa18.44■□□□□ 0.54
SMG1-213ENST00000567737 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
SMG1-213ENST00000567737 BBOX1O75936 387 aa18.43■□□□□ 0.54
SMG1-213ENST00000567737 EGFRP00533 1210 aa18.43■□□□□ 0.54
SMG1-213ENST00000567737 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
SMG1-213ENST00000567737 GPR25O00155 361 aa18.42■□□□□ 0.54
SMG1-213ENST00000567737 PSMD14O00487 310 aa18.42■□□□□ 0.54
SMG1-213ENST00000567737 CDCA5Q96FF9 252 aa18.42■□□□□ 0.54
SMG1-213ENST00000567737 RPS12P25398 132 aaKnown RBP18.41■□□□□ 0.54
SMG1-213ENST00000567737 KIF4BQ2VIQ3 1234 aa18.41■□□□□ 0.54
SMG1-213ENST00000567737 NOM1Q5C9Z4 860 aaKnown RBP18.41■□□□□ 0.54
SMG1-213ENST00000567737 ZNF34Q8IZ26 560 aa18.41■□□□□ 0.54
SMG1-213ENST00000567737 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
SMG1-213ENST00000567737 GGA3Q9NZ52 723 aa18.41■□□□□ 0.54
SMG1-213ENST00000567737 NUP98P52948 1817 aa18.41■□□□□ 0.54
SMG1-213ENST00000567737 FKBP1BP68106 108 aa18.4■□□□□ 0.54
SMG1-213ENST00000567737 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMG1-213ENST00000567737 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
SMG1-213ENST00000567737 MCM10Q7L590 875 aa18.4■□□□□ 0.54
SMG1-213ENST00000567737 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
SMG1-213ENST00000567737 PRKAR2BP31323 418 aa18.39■□□□□ 0.53
SMG1-213ENST00000567737 PARP10Q53GL7 1025 aa18.39■□□□□ 0.53
SMG1-213ENST00000567737 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.53
SMG1-213ENST00000567737 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
SMG1-213ENST00000567737 FKTNO75072 461 aa18.38■□□□□ 0.53
SMG1-213ENST00000567737 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
SMG1-213ENST00000567737 SLC10A5Q5PT55 438 aa18.38■□□□□ 0.53
SMG1-213ENST00000567737 DBNDD1Q9H9R9 158 aa18.38■□□□□ 0.53
SMG1-213ENST00000567737 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
SMG1-213ENST00000567737 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
SMG1-213ENST00000567737 POLR2AP24928 1970 aaKnown RBP18.37■□□□□ 0.53
SMG1-213ENST00000567737 POTEFA5A3E0 1075 aa18.37■□□□□ 0.53
SMG1-213ENST00000567737 MYL6BP14649 208 aa18.37■□□□□ 0.53
SMG1-213ENST00000567737 WASHC4Q2M389 1173 aa18.37■□□□□ 0.53
SMG1-213ENST00000567737 GIGYF2Q6Y7W6 1299 aaKnown RBP18.37■□□□□ 0.53
SMG1-213ENST00000567737 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
SMG1-213ENST00000567737 UTP14AQ9BVJ6 771 aaKnown RBP18.37■□□□□ 0.53
SMG1-213ENST00000567737 DLL1O00548 723 aa18.36■□□□□ 0.53
SMG1-213ENST00000567737 GRAPQ13588 217 aa18.36■□□□□ 0.53
SMG1-213ENST00000567737 GRAPLQ8TC17 118 aaPredicted RBP18.36■□□□□ 0.53
SMG1-213ENST00000567737 PAPPA2Q9BXP8 1791 aa18.35■□□□□ 0.53
SMG1-213ENST00000567737 TM4SF4P48230 202 aa18.35■□□□□ 0.53
SMG1-213ENST00000567737 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
SMG1-213ENST00000567737 TMC4Q7Z404 712 aa18.35■□□□□ 0.53
SMG1-213ENST00000567737 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
SMG1-213ENST00000567737 ASTN2O75129 1339 aaPredicted RBP18.34■□□□□ 0.53
SMG1-213ENST00000567737 MKI67P46013 3256 aaKnown RBP18.34■□□□□ 0.53
SMG1-213ENST00000567737 SREBF2Q12772 1141 aa18.34■□□□□ 0.53
SMG1-213ENST00000567737 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
SMG1-213ENST00000567737 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
SMG1-213ENST00000567737 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
SMG1-213ENST00000567737 COLQQ9Y215 455 aaPredicted RBP18.34■□□□□ 0.53
SMG1-213ENST00000567737 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
SMG1-213ENST00000567737 RIMBP2O15034 1052 aa18.33■□□□□ 0.52
SMG1-213ENST00000567737 ECE2O60344 883 aa18.33■□□□□ 0.52
SMG1-213ENST00000567737 ANGEL2Q5VTE6 544 aaKnown RBP18.33■□□□□ 0.52
SMG1-213ENST00000567737 CFHR5Q9BXR6 569 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms