RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 NEXNQ0ZGT2 675 aa14.36□□□□□ -0.11
CDH3-206ENST00000567674 CWC25Q9NXE8 425 aaPredicted RBP14.36□□□□□ -0.11
CDH3-206ENST00000567674 ABCC4O15439 1325 aa14.36□□□□□ -0.11
CDH3-206ENST00000567674 CNTNAP1P78357 1384 aa14.35□□□□□ -0.11
CDH3-206ENST00000567674 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
CDH3-206ENST00000567674 CACNA1FO60840 1977 aa14.35□□□□□ -0.11
CDH3-206ENST00000567674 ELL2O00472 640 aaPredicted RBP14.35□□□□□ -0.11
CDH3-206ENST00000567674 PHAXQ9H814 394 aaKnown RBP14.35□□□□□ -0.11
CDH3-206ENST00000567674 ZNF277Q9NRM2 450 aaPredicted RBP14.35□□□□□ -0.11
CDH3-206ENST00000567674 CDHR2Q9BYE9 1310 aa14.35□□□□□ -0.11
CDH3-206ENST00000567674 SCN4AP35499 1836 aa14.34□□□□□ -0.11
CDH3-206ENST00000567674 IRS4O14654 1257 aaPredicted RBP14.34□□□□□ -0.11
CDH3-206ENST00000567674 PDE8AO60658 829 aa14.34□□□□□ -0.11
CDH3-206ENST00000567674 HCLS1P14317 486 aaPredicted RBP14.34□□□□□ -0.11
CDH3-206ENST00000567674 RGS19P49795 217 aa14.34□□□□□ -0.11
CDH3-206ENST00000567674 EIF6P56537 245 aaKnown RBP14.34□□□□□ -0.11
CDH3-206ENST00000567674 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
CDH3-206ENST00000567674 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
CDH3-206ENST00000567674 ATP5J2-PTCD1G3V325 749 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 VAMP4O75379 141 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 DDNO94850 711 aaPredicted RBP14.33□□□□□ -0.12
CDH3-206ENST00000567674 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
CDH3-206ENST00000567674 C3orf67Q6ZVT6 689 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 MPNDQ8N594 471 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 TSR2Q969E8 191 aaKnown RBP14.33□□□□□ -0.12
CDH3-206ENST00000567674 FAM89AQ96GI7 184 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 FANCIQ9NVI1 1328 aa14.33□□□□□ -0.12
CDH3-206ENST00000567674 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 LBX1P52954 281 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 RPS8P62241 208 aaKnown RBP14.32□□□□□ -0.12
CDH3-206ENST00000567674 KIAA2012Q0VF49 1180 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 LARGE2Q8N3Y3 721 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 MYD88Q99836 296 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 HACL1Q9UJ83 578 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 MAP3K2Q9Y2U5 619 aa14.32□□□□□ -0.12
CDH3-206ENST00000567674 NIM1KQ8IY84 436 aa14.31□□□□□ -0.12
CDH3-206ENST00000567674 TAF1DQ9H5J8 278 aaPredicted RBP14.31□□□□□ -0.12
CDH3-206ENST00000567674 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
CDH3-206ENST00000567674 ZNF521Q96K83 1311 aa14.31□□□□□ -0.12
CDH3-206ENST00000567674 RTL9Q8NET4 1388 aa14.31□□□□□ -0.12
CDH3-206ENST00000567674 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
CDH3-206ENST00000567674 FLIIQ13045 1269 aa14.3□□□□□ -0.12
CDH3-206ENST00000567674 TNIP1Q15025 636 aa14.3□□□□□ -0.12
CDH3-206ENST00000567674 FAM9BQ8IZU0 186 aa14.3□□□□□ -0.12
CDH3-206ENST00000567674 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
CDH3-206ENST00000567674 EYA3Q99504 573 aa14.3□□□□□ -0.12
CDH3-206ENST00000567674 PLA2G12BQ9BX93 195 aa14.3□□□□□ -0.12
CDH3-206ENST00000567674 H7C1W4 665 aa14.29□□□□□ -0.12
CDH3-206ENST00000567674 PPIP5K2O43314 1243 aa14.29□□□□□ -0.12
CDH3-206ENST00000567674 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
CDH3-206ENST00000567674 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
CDH3-206ENST00000567674 CDC5LQ99459 802 aaKnown RBP14.29□□□□□ -0.12
CDH3-206ENST00000567674 LAMB2P55268 1798 aa14.29□□□□□ -0.12
CDH3-206ENST00000567674 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
CDH3-206ENST00000567674 E9PSI1 815 aa14.28□□□□□ -0.12
CDH3-206ENST00000567674 IGKV5-2P06315 115 aa14.28□□□□□ -0.12
CDH3-206ENST00000567674 LMOD1P29536 600 aaPredicted RBP14.28□□□□□ -0.12
CDH3-206ENST00000567674 VEGFBP49765 207 aa14.28□□□□□ -0.12
CDH3-206ENST00000567674 MMP14P50281 582 aa14.28□□□□□ -0.12
CDH3-206ENST00000567674 DNAAF4Q8WXU2 420 aa14.28□□□□□ -0.12
CDH3-206ENST00000567674 LRRC37AA6NMS7 1700 aa14.27□□□□□ -0.12
CDH3-206ENST00000567674 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.12
CDH3-206ENST00000567674 ZNF541Q9H0D2 1346 aa14.27□□□□□ -0.12
CDH3-206ENST00000567674 CCDC85CA6NKD9 419 aa14.27□□□□□ -0.13
CDH3-206ENST00000567674 CT47B1P0C2W7 299 aaPredicted RBP14.27□□□□□ -0.13
CDH3-206ENST00000567674 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
CDH3-206ENST00000567674 EPHX2P34913 555 aa14.27□□□□□ -0.13
CDH3-206ENST00000567674 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
CDH3-206ENST00000567674 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
CDH3-206ENST00000567674 PASKQ96RG2 1323 aa14.26□□□□□ -0.13
CDH3-206ENST00000567674 CTSWP56202 376 aa14.26□□□□□ -0.13
CDH3-206ENST00000567674 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
CDH3-206ENST00000567674 GCKRQ14397 625 aa14.26□□□□□ -0.13
CDH3-206ENST00000567674 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
CDH3-206ENST00000567674 DPF2Q92785 391 aa14.26□□□□□ -0.13
CDH3-206ENST00000567674 CELF1Q92879 486 aaKnown RBP14.26□□□□□ -0.13
CDH3-206ENST00000567674 BSDC1Q9NW68 430 aaPredicted RBP14.26□□□□□ -0.13
CDH3-206ENST00000567674 TMEM88BA6NKF7 163 aa14.25□□□□□ -0.13
CDH3-206ENST00000567674 CSF1RP07333 972 aa14.25□□□□□ -0.13
CDH3-206ENST00000567674 RPS12P25398 132 aaKnown RBP14.25□□□□□ -0.13
CDH3-206ENST00000567674 MAP2K1Q02750 393 aaPredicted RBP14.25□□□□□ -0.13
CDH3-206ENST00000567674 AOC3Q16853 763 aa14.25□□□□□ -0.13
CDH3-206ENST00000567674 CIAPIN1Q6FI81 312 aa14.25□□□□□ -0.13
CDH3-206ENST00000567674 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
CDH3-206ENST00000567674 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
CDH3-206ENST00000567674 ADARB2Q9NS39 739 aaKnown RBP14.25□□□□□ -0.13
CDH3-206ENST00000567674 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
CDH3-206ENST00000567674 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
CDH3-206ENST00000567674 ATP2B4P23634 1241 aa14.24□□□□□ -0.13
CDH3-206ENST00000567674 CXCL9Q07325 125 aa14.24□□□□□ -0.13
CDH3-206ENST00000567674 ZC3H12CQ9C0D7 883 aaKnown RBP14.24□□□□□ -0.13
CDH3-206ENST00000567674 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms