RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
COMMD4-218ENST00000567377 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
COMMD4-218ENST00000567377 VAMP4O75379 141 aa23.26■■□□□ 1.31
COMMD4-218ENST00000567377 LARGE2Q8N3Y3 721 aa23.26■■□□□ 1.31
COMMD4-218ENST00000567377 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
COMMD4-218ENST00000567377 EIF6P56537 245 aaKnown RBP23.25■■□□□ 1.31
COMMD4-218ENST00000567377 DPP8Q6V1X1 898 aaPredicted RBP23.25■■□□□ 1.31
COMMD4-218ENST00000567377 MPNDQ8N594 471 aa23.25■■□□□ 1.31
COMMD4-218ENST00000567377 LAMB2P55268 1798 aa23.24■■□□□ 1.31
COMMD4-218ENST00000567377 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
COMMD4-218ENST00000567377 GPC2Q8N158 579 aa23.24■■□□□ 1.31
COMMD4-218ENST00000567377 PDE8AO60658 829 aa23.23■■□□□ 1.31
COMMD4-218ENST00000567377 FLIIQ13045 1269 aa23.23■■□□□ 1.31
COMMD4-218ENST00000567377 CCDC152Q4G0S7 254 aa23.22■■□□□ 1.31
COMMD4-218ENST00000567377 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
COMMD4-218ENST00000567377 NIM1KQ8IY84 436 aa23.22■■□□□ 1.31
COMMD4-218ENST00000567377 CDHR2Q9BYE9 1310 aa23.22■■□□□ 1.31
COMMD4-218ENST00000567377 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
COMMD4-218ENST00000567377 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
COMMD4-218ENST00000567377 PPIP5K2O43314 1243 aa23.21■■□□□ 1.31
COMMD4-218ENST00000567377 RPS8P62241 208 aaKnown RBP23.21■■□□□ 1.31
COMMD4-218ENST00000567377 ZNF428Q96B54 188 aa23.21■■□□□ 1.31
COMMD4-218ENST00000567377 SCN4AP35499 1836 aa23.2■■□□□ 1.3
COMMD4-218ENST00000567377 ZNF521Q96K83 1311 aa23.2■■□□□ 1.3
COMMD4-218ENST00000567377 ZNF541Q9H0D2 1346 aa23.2■■□□□ 1.3
COMMD4-218ENST00000567377 IGKV5-2P06315 115 aa23.2■■□□□ 1.3
COMMD4-218ENST00000567377 FKBP5Q13451 457 aaPredicted RBP23.2■■□□□ 1.3
COMMD4-218ENST00000567377 HACL1Q9UJ83 578 aa23.2■■□□□ 1.3
COMMD4-218ENST00000567377 G2E3Q7L622 706 aa23.19■■□□□ 1.3
COMMD4-218ENST00000567377 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
COMMD4-218ENST00000567377 SPINK5Q9NQ38 1064 aaPredicted RBP23.19■■□□□ 1.3
COMMD4-218ENST00000567377 NEURL1BA8MQ27 555 aa23.18■■□□□ 1.3
COMMD4-218ENST00000567377 KIAA2012Q0VF49 1180 aa23.18■■□□□ 1.3
COMMD4-218ENST00000567377 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
COMMD4-218ENST00000567377 CELF1Q92879 486 aaKnown RBP23.18■■□□□ 1.3
COMMD4-218ENST00000567377 TAF1DQ9H5J8 278 aaPredicted RBP23.18■■□□□ 1.3
COMMD4-218ENST00000567377 AOC3Q16853 763 aa23.17■■□□□ 1.3
COMMD4-218ENST00000567377 CHADLQ6NUI6 762 aa23.17■■□□□ 1.3
COMMD4-218ENST00000567377 LDHDQ86WU2 507 aa23.17■■□□□ 1.3
COMMD4-218ENST00000567377 LINS1Q8NG48 757 aa23.17■■□□□ 1.3
COMMD4-218ENST00000567377 ZNRF3Q9ULT6 936 aa23.17■■□□□ 1.3
COMMD4-218ENST00000567377 E9PSI1 815 aa23.15■■□□□ 1.3
COMMD4-218ENST00000567377 H7C1W4 665 aa23.15■■□□□ 1.3
COMMD4-218ENST00000567377 LMOD1P29536 600 aaPredicted RBP23.15■■□□□ 1.3
COMMD4-218ENST00000567377 EYA3Q99504 573 aa23.15■■□□□ 1.3
COMMD4-218ENST00000567377 NSFL1CQ9UNZ2 370 aaKnown RBP23.15■■□□□ 1.3
COMMD4-218ENST00000567377 EPHX2P34913 555 aa23.14■■□□□ 1.29
COMMD4-218ENST00000567377 GCKRQ14397 625 aa23.14■■□□□ 1.29
COMMD4-218ENST00000567377 CWF19L2Q2TBE0 894 aaKnown RBP23.14■■□□□ 1.29
COMMD4-218ENST00000567377 CDC5LQ99459 802 aaKnown RBP23.14■■□□□ 1.29
COMMD4-218ENST00000567377 GJA3Q9Y6H8 435 aa23.14■■□□□ 1.29
COMMD4-218ENST00000567377 CTSWP56202 376 aa23.13■■□□□ 1.29
COMMD4-218ENST00000567377 TNIP1Q15025 636 aa23.13■■□□□ 1.29
COMMD4-218ENST00000567377 WASHC4Q2M389 1173 aa23.13■■□□□ 1.29
COMMD4-218ENST00000567377 ANKRD18AQ8IVF6 992 aa23.13■■□□□ 1.29
COMMD4-218ENST00000567377 PODXL2Q9NZ53 605 aa23.13■■□□□ 1.29
COMMD4-218ENST00000567377 LRRC37AA6NMS7 1700 aa23.13■■□□□ 1.29
COMMD4-218ENST00000567377 TAF1P21675 1872 aa23.12■■□□□ 1.29
COMMD4-218ENST00000567377 SLC51AQ86UW1 340 aa23.12■■□□□ 1.29
COMMD4-218ENST00000567377 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
COMMD4-218ENST00000567377 SEC31BQ9NQW1 1179 aa23.12■■□□□ 1.29
COMMD4-218ENST00000567377 COL4A5P29400 1685 aa23.12■■□□□ 1.29
COMMD4-218ENST00000567377 RTL9Q8NET4 1388 aa23.12■■□□□ 1.29
COMMD4-218ENST00000567377 C6orf229H3BNL8 230 aa23.11■■□□□ 1.29
COMMD4-218ENST00000567377 UBE3BQ7Z3V4 1068 aa23.11■■□□□ 1.29
COMMD4-218ENST00000567377 DNAJC5GQ8N7S2 189 aa23.11■■□□□ 1.29
COMMD4-218ENST00000567377 TTLL11Q8NHH1 800 aa23.11■■□□□ 1.29
COMMD4-218ENST00000567377 JARID2Q92833 1246 aaPredicted RBP23.11■■□□□ 1.29
COMMD4-218ENST00000567377 GPSM2P81274 684 aa23.1■■□□□ 1.29
COMMD4-218ENST00000567377 CXCL9Q07325 125 aa23.1■■□□□ 1.29
COMMD4-218ENST00000567377 CIAPIN1Q6FI81 312 aa23.1■■□□□ 1.29
COMMD4-218ENST00000567377 EAPPQ56P03 285 aaPredicted RBP23.09■■□□□ 1.29
COMMD4-218ENST00000567377 ANKIB1Q9P2G1 1089 aa23.09■■□□□ 1.29
COMMD4-218ENST00000567377 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
COMMD4-218ENST00000567377 TBC1D16Q8TBP0 767 aa23.08■■□□□ 1.29
COMMD4-218ENST00000567377 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
COMMD4-218ENST00000567377 BSDC1Q9NW68 430 aaPredicted RBP23.08■■□□□ 1.29
COMMD4-218ENST00000567377 POLLQ9UGP5 575 aa23.08■■□□□ 1.29
COMMD4-218ENST00000567377 CLEC11AQ9Y240 323 aa23.08■■□□□ 1.29
COMMD4-218ENST00000567377 POTEIP0CG38 1075 aa23.07■■□□□ 1.28
COMMD4-218ENST00000567377 POTEJP0CG39 1038 aa23.07■■□□□ 1.28
COMMD4-218ENST00000567377 SCNN1DP51172 638 aa23.07■■□□□ 1.28
COMMD4-218ENST00000567377 SLFN5Q08AF3 891 aa23.07■■□□□ 1.28
COMMD4-218ENST00000567377 BEND3Q5T5X7 828 aa23.07■■□□□ 1.28
COMMD4-218ENST00000567377 GGA1Q9UJY5 639 aa23.07■■□□□ 1.28
COMMD4-218ENST00000567377 CASP7P55210 303 aa23.06■■□□□ 1.28
COMMD4-218ENST00000567377 KLRG1Q96E93 195 aa23.06■■□□□ 1.28
COMMD4-218ENST00000567377 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-218ENST00000567377 GPRC5DQ9NZD1 345 aa23.06■■□□□ 1.28
COMMD4-218ENST00000567377 MYH3P11055 1940 aa23.06■■□□□ 1.28
COMMD4-218ENST00000567377 XDHP47989 1333 aa23.06■■□□□ 1.28
COMMD4-218ENST00000567377 DUOX1Q9NRD9 1551 aa23.06■■□□□ 1.28
COMMD4-218ENST00000567377 ALDH1L1O75891 902 aa23.05■■□□□ 1.28
COMMD4-218ENST00000567377 CSF1RP07333 972 aa23.05■■□□□ 1.28
COMMD4-218ENST00000567377 GREM2Q9H772 168 aa23.05■■□□□ 1.28
COMMD4-218ENST00000567377 ADARB2Q9NS39 739 aaKnown RBP23.05■■□□□ 1.28
COMMD4-218ENST00000567377 F6X3S4 739 aa23.04■■□□□ 1.28
COMMD4-218ENST00000567377 UFL1O94874 794 aa23.04■■□□□ 1.28
COMMD4-218ENST00000567377 ATP2B4P23634 1241 aa23.04■■□□□ 1.28
COMMD4-218ENST00000567377 IGHMBP2P38935 993 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms