RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GRM8O00222 908 aa15.75■□□□□ 0.11
RNF40-211ENST00000567365 C21orf2O43822 256 aa15.75■□□□□ 0.11
RNF40-211ENST00000567365 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
RNF40-211ENST00000567365 SLC51AQ86UW1 340 aa15.75■□□□□ 0.11
RNF40-211ENST00000567365 LTBP3Q9NS15 1303 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 CSF1RP07333 972 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 CTSWP56202 376 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 SLC4A10Q6U841 1118 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 OLFM4Q6UX06 510 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 TTLL11Q8NHH1 800 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 KAZALD1Q96I82 304 aa15.74■□□□□ 0.11
RNF40-211ENST00000567365 API5Q9BZZ5 524 aaKnown RBP15.74■□□□□ 0.11
RNF40-211ENST00000567365 GPBP1L1Q9HC44 474 aaPredicted RBP15.74■□□□□ 0.11
RNF40-211ENST00000567365 BBOX1O75936 387 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 TRIM27P14373 513 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 FOXO4P98177 505 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 GRAPQ13588 217 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 IFFO2Q5TF58 517 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
RNF40-211ENST00000567365 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
RNF40-211ENST00000567365 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
RNF40-211ENST00000567365 CCDC88AQ3V6T2 1871 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 LTBP1Q14766 1721 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 NBPF7P0C2Y1 421 aaPredicted RBP15.72■□□□□ 0.11
RNF40-211ENST00000567365 EPHA10Q5JZY3 1008 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 SOGA3Q5TF21 947 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 INTS3Q68E01 1043 aaKnown RBP15.72■□□□□ 0.11
RNF40-211ENST00000567365 CC2D2BQ6DHV5 1058 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 DDX46Q7L014 1031 aaKnown RBP15.72■□□□□ 0.11
RNF40-211ENST00000567365 SEC31BQ9NQW1 1179 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
RNF40-211ENST00000567365 DICER1Q9UPY3 1922 aaKnown RBP15.72■□□□□ 0.11
RNF40-211ENST00000567365 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
RNF40-211ENST00000567365 RASSF7Q02833 373 aa15.71■□□□□ 0.11
RNF40-211ENST00000567365 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
RNF40-211ENST00000567365 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
RNF40-211ENST00000567365 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
RNF40-211ENST00000567365 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
RNF40-211ENST00000567365 SP8Q8IXZ3 490 aa15.7■□□□□ 0.1
RNF40-211ENST00000567365 GREM2Q9H772 168 aa15.7■□□□□ 0.1
RNF40-211ENST00000567365 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
RNF40-211ENST00000567365 CEP350Q5VT06 3117 aa15.69■□□□□ 0.1
RNF40-211ENST00000567365 KIF3CO14782 793 aa15.69■□□□□ 0.1
RNF40-211ENST00000567365 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
RNF40-211ENST00000567365 RPS8P62241 208 aaKnown RBP15.69■□□□□ 0.1
RNF40-211ENST00000567365 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
RNF40-211ENST00000567365 TMC4Q7Z404 712 aa15.69■□□□□ 0.1
RNF40-211ENST00000567365 RTKN2Q8IZC4 609 aa15.69■□□□□ 0.1
RNF40-211ENST00000567365 SUCLG2Q96I99 432 aa15.69■□□□□ 0.1
RNF40-211ENST00000567365 PSMD1Q99460 953 aa15.69■□□□□ 0.1
RNF40-211ENST00000567365 C9orf78Q9NZ63 289 aaPredicted RBP15.69■□□□□ 0.1
RNF40-211ENST00000567365 HSPA6P17066 643 aa15.68■□□□□ 0.1
RNF40-211ENST00000567365 LMNB1P20700 586 aa15.68■□□□□ 0.1
RNF40-211ENST00000567365 FKBP4Q02790 459 aaKnown RBP eCLIP15.68■□□□□ 0.1
RNF40-211ENST00000567365 GRIPAP1Q4V328 841 aa15.68■□□□□ 0.1
RNF40-211ENST00000567365 ZKSCAN2Q63HK3 967 aa15.68■□□□□ 0.1
RNF40-211ENST00000567365 RTFDC1Q9BY42 306 aaPredicted RBP15.68■□□□□ 0.1
RNF40-211ENST00000567365 TAOK3Q9H2K8 898 aa15.68■□□□□ 0.1
RNF40-211ENST00000567365 FAM161AQ3B820 660 aa15.67■□□□□ 0.1
RNF40-211ENST00000567365 C9orf131Q5VYM1 1079 aa15.67■□□□□ 0.1
RNF40-211ENST00000567365 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
RNF40-211ENST00000567365 RCAN3Q9UKA8 241 aa15.67■□□□□ 0.1
RNF40-211ENST00000567365 TIAM2Q8IVF5 1701 aa15.67■□□□□ 0.1
RNF40-211ENST00000567365 COL4A5P29400 1685 aa15.67■□□□□ 0.1
RNF40-211ENST00000567365 RLBP1P12271 317 aa15.66■□□□□ 0.1
RNF40-211ENST00000567365 ANKRD44Q8N8A2 993 aa15.66■□□□□ 0.1
RNF40-211ENST00000567365 FRAT1Q92837 279 aaPredicted RBP15.66■□□□□ 0.1
RNF40-211ENST00000567365 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
RNF40-211ENST00000567365 ITGA6P23229 1130 aa15.65■□□□□ 0.1
RNF40-211ENST00000567365 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
RNF40-211ENST00000567365 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
RNF40-211ENST00000567365 MEIS3Q99687 375 aa15.65■□□□□ 0.1
RNF40-211ENST00000567365 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
RNF40-211ENST00000567365 A0A1B0GUL6 1792 aa15.64■□□□□ 0.1
RNF40-211ENST00000567365 TMEM57Q8N5G2 664 aa15.64■□□□□ 0.09
RNF40-211ENST00000567365 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
RNF40-211ENST00000567365 CDC5LQ99459 802 aaKnown RBP15.64■□□□□ 0.09
RNF40-211ENST00000567365 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
RNF40-211ENST00000567365 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.09
RNF40-211ENST00000567365 PODXL2Q9NZ53 605 aa15.64■□□□□ 0.09
RNF40-211ENST00000567365 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
RNF40-211ENST00000567365 ANKRD18AQ8IVF6 992 aa15.63■□□□□ 0.09
RNF40-211ENST00000567365 ZNF277Q9NRM2 450 aaPredicted RBP15.63■□□□□ 0.09
RNF40-211ENST00000567365 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
RNF40-211ENST00000567365 GPSM2P81274 684 aa15.62■□□□□ 0.09
RNF40-211ENST00000567365 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
RNF40-211ENST00000567365 MPNDQ8N594 471 aa15.62■□□□□ 0.09
RNF40-211ENST00000567365 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
RNF40-211ENST00000567365 VPS33BQ9H267 617 aa15.61■□□□□ 0.09
RNF40-211ENST00000567365 POLLQ9UGP5 575 aa15.61■□□□□ 0.09
RNF40-211ENST00000567365 MINPP1Q9UNW1 487 aa15.61■□□□□ 0.09
RNF40-211ENST00000567365 ANKRD18BA2A2Z9 1011 aa15.6■□□□□ 0.09
RNF40-211ENST00000567365 UBTFL1P0CB47 393 aaPredicted RBP15.6■□□□□ 0.09
RNF40-211ENST00000567365 IFIT5Q13325 482 aaKnown RBP15.6■□□□□ 0.09
RNF40-211ENST00000567365 DPP8Q6V1X1 898 aaPredicted RBP15.6■□□□□ 0.09
RNF40-211ENST00000567365 LRRFIP2Q9Y608 721 aaKnown RBP15.6■□□□□ 0.09
RNF40-211ENST00000567365 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms