RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ATP5JP18859 108 aa28.11■■■□□ 2.09
LINC00543-201ENST00000567234 KIAA1211Q6ZU35 1233 aa28.11■■■□□ 2.09
LINC00543-201ENST00000567234 ZBTB38Q8NAP3 1195 aaPredicted RBP28.11■■■□□ 2.09
LINC00543-201ENST00000567234 FBXO3Q9UK99 471 aa28.11■■■□□ 2.09
LINC00543-201ENST00000567234 CHMP3Q9Y3E7 222 aa28.11■■■□□ 2.09
LINC00543-201ENST00000567234 EP400Q96L91 3159 aa28.11■■■□□ 2.09
LINC00543-201ENST00000567234 IL15P40933 162 aaPredicted RBP28.11■■■□□ 2.09
LINC00543-201ENST00000567234 LSG1Q9H089 658 aaKnown RBP28.11■■■□□ 2.09
LINC00543-201ENST00000567234 BTAF1O14981 1849 aa28.1■■■□□ 2.09
LINC00543-201ENST00000567234 CDHR2Q9BYE9 1310 aa28.1■■■□□ 2.09
LINC00543-201ENST00000567234 ZBTB1Q9Y2K1 713 aa28.1■■■□□ 2.09
LINC00543-201ENST00000567234 RREB1Q92766 1687 aa28.09■■■□□ 2.09
LINC00543-201ENST00000567234 CWC27Q6UX04 472 aaKnown RBP28.09■■■□□ 2.09
LINC00543-201ENST00000567234 ATG9AQ7Z3C6 839 aa28.09■■■□□ 2.09
LINC00543-201ENST00000567234 DBNLQ9UJU6 430 aaKnown RBP28.09■■■□□ 2.09
LINC00543-201ENST00000567234 EYA2O00167 538 aa28.08■■■□□ 2.09
LINC00543-201ENST00000567234 MCM4P33991 863 aa28.08■■■□□ 2.09
LINC00543-201ENST00000567234 SNRKQ9NRH2 765 aa28.08■■■□□ 2.09
LINC00543-201ENST00000567234 PALD1Q9ULE6 856 aa28.08■■■□□ 2.09
LINC00543-201ENST00000567234 XRCC6P12956 609 aaKnown RBP eCLIP28.07■■■□□ 2.08
LINC00543-201ENST00000567234 BOLA2Q9H3K6 86 aa28.07■■■□□ 2.08
LINC00543-201ENST00000567234 MYH3P11055 1940 aa28.07■■■□□ 2.08
LINC00543-201ENST00000567234 PTMSP20962 102 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 NEK4P51957 841 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 POTEAQ6S8J7 498 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 NLRP10Q86W26 655 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 ZNF831Q5JPB2 1677 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 RFX7Q2KHR2 1363 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 PALLDQ8WX93 1383 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 CSF1RP07333 972 aa28.06■■■□□ 2.08
LINC00543-201ENST00000567234 HLFQ16534 295 aa28.05■■■□□ 2.08
LINC00543-201ENST00000567234 KRT27Q7Z3Y8 459 aa28.05■■■□□ 2.08
LINC00543-201ENST00000567234 DDX11L8A8MPP1 907 aa28.04■■■□□ 2.08
LINC00543-201ENST00000567234 CCDC57Q2TAC2 916 aa28.04■■■□□ 2.08
LINC00543-201ENST00000567234 TICAM2Q86XR7 235 aa28.04■■■□□ 2.08
LINC00543-201ENST00000567234 SMARCC1Q92922 1105 aaPredicted RBP28.04■■■□□ 2.08
LINC00543-201ENST00000567234 CWC22Q9HCG8 908 aaKnown RBP28.04■■■□□ 2.08
LINC00543-201ENST00000567234 RXRBP28702 533 aa28.04■■■□□ 2.08
LINC00543-201ENST00000567234 EIF5P55010 431 aaKnown RBP28.04■■■□□ 2.08
LINC00543-201ENST00000567234 RAB3GAP1Q15042 981 aa28.04■■■□□ 2.08
LINC00543-201ENST00000567234 DZIP3Q86Y13 1208 aaKnown RBP28.04■■■□□ 2.08
LINC00543-201ENST00000567234 ARXQ96QS3 562 aa28.04■■■□□ 2.08
LINC00543-201ENST00000567234 CCDC87Q9NVE4 849 aa28.03■■■□□ 2.08
LINC00543-201ENST00000567234 LOC102724428A0A0B4J2F2 783 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 SIK1P57059 783 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 FAM89AQ96GI7 184 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 PKNOX2Q96KN3 472 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 DBNDD2Q9BQY9 259 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 FSD1Q9BTV5 496 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 INTS5Q6P9B9 1019 aaKnown RBP28.02■■■□□ 2.08
LINC00543-201ENST00000567234 HAUS7Q99871 368 aa28.02■■■□□ 2.08
LINC00543-201ENST00000567234 ATP6V1AP38606 617 aa28.01■■■□□ 2.07
LINC00543-201ENST00000567234 ZNF609O15014 1411 aa28■■■□□ 2.07
LINC00543-201ENST00000567234 KCNB2Q92953 911 aa28■■■□□ 2.07
LINC00543-201ENST00000567234 SNX14Q9Y5W7 946 aa27.99■■■□□ 2.07
LINC00543-201ENST00000567234 KCNQ4P56696 695 aa27.99■■■□□ 2.07
LINC00543-201ENST00000567234 NMIQ13287 307 aaPredicted RBP27.99■■■□□ 2.07
LINC00543-201ENST00000567234 ITPK1Q13572 414 aa27.99■■■□□ 2.07
LINC00543-201ENST00000567234 LRRC24Q50LG9 513 aa27.99■■■□□ 2.07
LINC00543-201ENST00000567234 ZNF34Q8IZ26 560 aa27.99■■■□□ 2.07
LINC00543-201ENST00000567234 MYH14Q7Z406 1995 aaKnown RBP27.98■■■□□ 2.07
LINC00543-201ENST00000567234 CRKLP46109 303 aaKnown RBP27.98■■■□□ 2.07
LINC00543-201ENST00000567234 IFIT5Q13325 482 aaKnown RBP27.98■■■□□ 2.07
LINC00543-201ENST00000567234 HSP90AA2PQ14568 343 aaPredicted RBP27.98■■■□□ 2.07
LINC00543-201ENST00000567234 ZNF594Q96JF6 807 aaPredicted RBP27.98■■■□□ 2.07
LINC00543-201ENST00000567234 CEP126Q9P2H0 1117 aa27.98■■■□□ 2.07
LINC00543-201ENST00000567234 CCDC171Q6TFL3 1326 aa27.98■■■□□ 2.07
LINC00543-201ENST00000567234 SPEF2Q9C093 1822 aa27.98■■■□□ 2.07
LINC00543-201ENST00000567234 GPTP24298 496 aa27.97■■■□□ 2.07
LINC00543-201ENST00000567234 AK7Q96M32 723 aa27.97■■■□□ 2.07
LINC00543-201ENST00000567234 FOXD4L1Q9NU39 408 aa27.97■■■□□ 2.07
LINC00543-201ENST00000567234 COL5A3P25940 1745 aaPredicted RBP27.97■■■□□ 2.07
LINC00543-201ENST00000567234 MED23Q9ULK4 1368 aa27.97■■■□□ 2.07
LINC00543-201ENST00000567234 TBC1D2BQ9UPU7 963 aa27.97■■■□□ 2.07
LINC00543-201ENST00000567234 AKAP2Q9Y2D5 859 aa27.97■■■□□ 2.07
LINC00543-201ENST00000567234 NUCB2P80303 420 aa27.96■■■□□ 2.07
LINC00543-201ENST00000567234 TNPO1Q92973 898 aaKnown RBP27.96■■■□□ 2.07
LINC00543-201ENST00000567234 TMX3Q96JJ7 454 aa27.96■■■□□ 2.07
LINC00543-201ENST00000567234 FAM227BQ96M60 508 aa27.96■■■□□ 2.07
LINC00543-201ENST00000567234 PTH1RQ03431 593 aa27.95■■■□□ 2.07
LINC00543-201ENST00000567234 CUL4AQ13619 759 aa27.95■■■□□ 2.07
LINC00543-201ENST00000567234 TTLL11Q8NHH1 800 aa27.95■■■□□ 2.07
LINC00543-201ENST00000567234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.95■■■□□ 2.07
LINC00543-201ENST00000567234 MAP4K1Q92918 833 aa27.95■■■□□ 2.07
LINC00543-201ENST00000567234 NAP1L5Q96NT1 182 aaPredicted RBP27.95■■■□□ 2.07
LINC00543-201ENST00000567234 GBP4Q96PP9 640 aa27.95■■■□□ 2.07
LINC00543-201ENST00000567234 TRMT112Q9UI30 125 aaKnown RBP27.95■■■□□ 2.07
LINC00543-201ENST00000567234 TPM2P07951 284 aa27.95■■■□□ 2.06
LINC00543-201ENST00000567234 CTSWP56202 376 aa27.95■■■□□ 2.06
LINC00543-201ENST00000567234 FAM196AQ6ZSG2 479 aa27.95■■■□□ 2.06
LINC00543-201ENST00000567234 NEUROD6Q96NK8 337 aa27.95■■■□□ 2.06
LINC00543-201ENST00000567234 IRS4O14654 1257 aaPredicted RBP27.94■■■□□ 2.06
LINC00543-201ENST00000567234 PDE8AO60658 829 aa27.94■■■□□ 2.06
LINC00543-201ENST00000567234 NECTIN1Q15223 517 aa27.94■■■□□ 2.06
LINC00543-201ENST00000567234 CLEC17AQ6ZS10 378 aa27.94■■■□□ 2.06
LINC00543-201ENST00000567234 PUS3Q9BZE2 481 aaKnown RBP27.94■■■□□ 2.06
LINC00543-201ENST00000567234 TM6SF1Q9BZW5 370 aa27.94■■■□□ 2.06
LINC00543-201ENST00000567234 A0A1B0GUL7 405 aa27.93■■■□□ 2.06
LINC00543-201ENST00000567234 TAF7LQ5H9L4 462 aa27.93■■■□□ 2.06
LINC00543-201ENST00000567234 INTS4Q96HW7 963 aaKnown RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms