RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 TERF1P54274 439 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 ARFGEF2Q9Y6D5 1785 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
BBS4-210ENST00000566400 KRT85P78386 507 aa11.09□□□□□ -0.63
BBS4-210ENST00000566400 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
BBS4-210ENST00000566400 FAM227BQ96M60 508 aa11.09□□□□□ -0.63
BBS4-210ENST00000566400 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
BBS4-210ENST00000566400 HAUS7Q99871 368 aa11.09□□□□□ -0.63
BBS4-210ENST00000566400 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
BBS4-210ENST00000566400 ELP1O95163 1332 aa11.09□□□□□ -0.63
BBS4-210ENST00000566400 H7C1W4 665 aa11.08□□□□□ -0.63
BBS4-210ENST00000566400 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.63
BBS4-210ENST00000566400 MCMDC2Q4G0Z9 681 aa11.08□□□□□ -0.63
BBS4-210ENST00000566400 UBE3BQ7Z3V4 1068 aa11.08□□□□□ -0.63
BBS4-210ENST00000566400 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.63
BBS4-210ENST00000566400 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.63
BBS4-210ENST00000566400 CWC25Q9NXE8 425 aaPredicted RBP11.08□□□□□ -0.63
BBS4-210ENST00000566400 MTMR6Q9Y217 621 aa11.08□□□□□ -0.63
BBS4-210ENST00000566400 KIF3AQ9Y496 699 aa11.08□□□□□ -0.63
BBS4-210ENST00000566400 SH3TC1Q8TE82 1336 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 A0A0D9SFI3 127 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
BBS4-210ENST00000566400 TAF5LO75529 589 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 TPM2P07951 284 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 IL15P40933 162 aaPredicted RBP11.08□□□□□ -0.64
BBS4-210ENST00000566400 ME3Q16798 604 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 LARP1BQ659C4 914 aaKnown RBP11.08□□□□□ -0.64
BBS4-210ENST00000566400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.08□□□□□ -0.64
BBS4-210ENST00000566400 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
BBS4-210ENST00000566400 HELLSQ9NRZ9 838 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
BBS4-210ENST00000566400 PALLDQ8WX93 1383 aa11.08□□□□□ -0.64
BBS4-210ENST00000566400 CIAO1O76071 339 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 CASP7P55210 303 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 TFCP2Q12800 502 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 EPHA10Q5JZY3 1008 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 TEX13AQ9BXU3 409 aaPredicted RBP11.07□□□□□ -0.64
BBS4-210ENST00000566400 TLR7Q9NYK1 1049 aaKnown RBP11.07□□□□□ -0.64
BBS4-210ENST00000566400 DBNLQ9UJU6 430 aaKnown RBP11.07□□□□□ -0.64
BBS4-210ENST00000566400 CNPY2Q9Y2B0 182 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 KBTBD3Q8NAB2 608 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 NEK1Q96PY6 1258 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 TPCN1Q9ULQ1 816 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 ZKSCAN5Q9Y2L8 839 aa11.07□□□□□ -0.64
BBS4-210ENST00000566400 UBR2Q8IWV8 1755 aa11.06□□□□□ -0.64
BBS4-210ENST00000566400 LLPHQ9BRT6 129 aaKnown RBP11.06□□□□□ -0.64
BBS4-210ENST00000566400 VPS37CA5D8V6 355 aaPredicted RBP11.05□□□□□ -0.64
BBS4-210ENST00000566400 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
BBS4-210ENST00000566400 OFD1O75665 1012 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 LARGE1O95461 756 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 CHRNA2Q15822 529 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 LMBR1LQ6UX01 489 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 TOM1L2Q6ZVM7 507 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 ZSCAN16Q9H4T2 348 aaPredicted RBP11.05□□□□□ -0.64
BBS4-210ENST00000566400 ANO8Q9HCE9 1232 aaPredicted RBP11.05□□□□□ -0.64
BBS4-210ENST00000566400 PRDM11Q9NQV5 511 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 GLI3P10071 1580 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 PAPPAQ13219 1627 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 FIBPO43427 364 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 TPM3P06753 285 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 IL2RBP14784 551 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 AKAP2Q9Y2D5 859 aa11.05□□□□□ -0.64
BBS4-210ENST00000566400 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 PTMAP06454 111 aaKnown RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 CPA1P15085 419 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 GOLGA6L4A6NEF3 574 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 EYA2O00167 538 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 CCDC192P0DO97 292 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 HMGN5P82970 282 aaKnown RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 FOXO4P98177 505 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 DNM1Q05193 864 aaKnown RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 ATL3Q6DD88 541 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 DNAJC2Q99543 621 aaKnown RBP11.04□□□□□ -0.64
BBS4-210ENST00000566400 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
BBS4-210ENST00000566400 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
BBS4-210ENST00000566400 ROBO1Q9Y6N7 1651 aa11.03□□□□□ -0.64
BBS4-210ENST00000566400 SOS2Q07890 1332 aaPredicted RBP11.03□□□□□ -0.64
BBS4-210ENST00000566400 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
BBS4-210ENST00000566400 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
BBS4-210ENST00000566400 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
BBS4-210ENST00000566400 TOB2Q14106 344 aaPredicted RBP11.03□□□□□ -0.64
BBS4-210ENST00000566400 POTEAQ6S8J7 498 aa11.03□□□□□ -0.64
BBS4-210ENST00000566400 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
BBS4-210ENST00000566400 GTF3C6Q969F1 213 aa11.03□□□□□ -0.64
BBS4-210ENST00000566400 CHAMP1Q96JM3 812 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms