RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 EPHA10Q5JZY3 1008 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 SUCLG2Q96I99 432 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 DICER1Q9UPY3 1922 aaKnown RBP10.31□□□□□ -0.76
CDH13-208ENST00000566333 A0A0G2JLW4 131 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 PDE8AO60658 829 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
CDH13-208ENST00000566333 MVPQ14764 893 aaKnown RBP10.3□□□□□ -0.76
CDH13-208ENST00000566333 SF3B3Q15393 1217 aaKnown RBP10.3□□□□□ -0.76
CDH13-208ENST00000566333 SLC51AQ86UW1 340 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 C2CD5Q86YS7 1000 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 ITPRIPQ8IWB1 547 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 ANKRD44Q8N8A2 993 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 C9orf78Q9NZ63 289 aaPredicted RBP10.3□□□□□ -0.76
CDH13-208ENST00000566333 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 ARAP2Q8WZ64 1704 aa10.3□□□□□ -0.76
CDH13-208ENST00000566333 CHD4Q14839 1912 aa10.29□□□□□ -0.76
CDH13-208ENST00000566333 HOXA10P31260 410 aaPredicted RBP10.29□□□□□ -0.76
CDH13-208ENST00000566333 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
CDH13-208ENST00000566333 RABL6Q3YEC7 729 aaPredicted RBP10.29□□□□□ -0.76
CDH13-208ENST00000566333 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.29□□□□□ -0.76
CDH13-208ENST00000566333 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
CDH13-208ENST00000566333 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
CDH13-208ENST00000566333 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
CDH13-208ENST00000566333 ZNF646O15015 1829 aaPredicted RBP10.28□□□□□ -0.76
CDH13-208ENST00000566333 H0YIN7 160 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
CDH13-208ENST00000566333 CSF1RP07333 972 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
CDH13-208ENST00000566333 MS4A1P11836 297 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 NPR1P16066 1061 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 STYK1Q6J9G0 422 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 MASTLQ96GX5 879 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 GREM2Q9H772 168 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
CDH13-208ENST00000566333 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
CDH13-208ENST00000566333 LRRFIP2Q9Y608 721 aaKnown RBP10.28□□□□□ -0.76
CDH13-208ENST00000566333 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
CDH13-208ENST00000566333 GNAI3P08754 354 aa10.27□□□□□ -0.77
CDH13-208ENST00000566333 PRPF40BQ6NWY9 871 aaKnown RBP10.27□□□□□ -0.77
CDH13-208ENST00000566333 RPGRQ92834 1020 aaKnown RBP10.27□□□□□ -0.77
CDH13-208ENST00000566333 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
CDH13-208ENST00000566333 SEC31BQ9NQW1 1179 aa10.27□□□□□ -0.77
CDH13-208ENST00000566333 WWC3Q9ULE0 1092 aa10.27□□□□□ -0.77
CDH13-208ENST00000566333 PSME4Q14997 1843 aa10.27□□□□□ -0.77
CDH13-208ENST00000566333 HSP90B1P14625 803 aaKnown RBP10.26□□□□□ -0.77
CDH13-208ENST00000566333 YBX3P16989 372 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH13-208ENST00000566333 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
CDH13-208ENST00000566333 MTX1Q13505 466 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 CCDC152Q4G0S7 254 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 LMBR1LQ6UX01 489 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 CELF1Q92879 486 aaKnown RBP10.26□□□□□ -0.77
CDH13-208ENST00000566333 CRAMP1Q96RY5 1269 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 CRBNQ96SW2 442 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 ZBTB40Q9NUA8 1239 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
CDH13-208ENST00000566333 MYH13Q9UKX3 1938 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 ITGA6P23229 1130 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 GRAPQ13588 217 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 OLFM4Q6UX06 510 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 GRAPLQ8TC17 118 aaPredicted RBP10.25□□□□□ -0.77
CDH13-208ENST00000566333 C7orf43Q8WVR3 580 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 ZNF622Q969S3 477 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDH13-208ENST00000566333 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 COL4A5P29400 1685 aa10.25□□□□□ -0.77
CDH13-208ENST00000566333 PPEF1O14829 653 aaPredicted RBP10.24□□□□□ -0.77
CDH13-208ENST00000566333 GNAI2P04899 355 aa10.24□□□□□ -0.77
CDH13-208ENST00000566333 RFX5P48382 616 aaPredicted RBP10.24□□□□□ -0.77
CDH13-208ENST00000566333 DDX46Q7L014 1031 aaKnown RBP10.24□□□□□ -0.77
CDH13-208ENST00000566333 TTLL6Q8N841 843 aa10.24□□□□□ -0.77
CDH13-208ENST00000566333 CNKSR1Q969H4 720 aa10.24□□□□□ -0.77
CDH13-208ENST00000566333 RBM17Q96I25 401 aaKnown RBP10.24□□□□□ -0.77
CDH13-208ENST00000566333 SCN9AQ15858 1988 aa10.24□□□□□ -0.77
CDH13-208ENST00000566333 PNMA6EA0A0J9YXQ4 647 aa10.23□□□□□ -0.77
CDH13-208ENST00000566333 DALRD3Q5D0E6 543 aaKnown RBP10.23□□□□□ -0.77
CDH13-208ENST00000566333 CEP85Q6P2H3 762 aa10.23□□□□□ -0.77
CDH13-208ENST00000566333 BCS1LQ9Y276 419 aa10.23□□□□□ -0.77
CDH13-208ENST00000566333 CENPBP07199 599 aaPredicted RBP10.22□□□□□ -0.77
CDH13-208ENST00000566333 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
CDH13-208ENST00000566333 IRX6P78412 446 aaPredicted RBP10.22□□□□□ -0.77
CDH13-208ENST00000566333 IFIT5Q13325 482 aaKnown RBP10.22□□□□□ -0.77
CDH13-208ENST00000566333 SIRT2Q8IXJ6 389 aa10.22□□□□□ -0.77
CDH13-208ENST00000566333 KLHDC4Q8TBB5 520 aa10.22□□□□□ -0.77
CDH13-208ENST00000566333 ZNF594Q96JF6 807 aaPredicted RBP10.22□□□□□ -0.77
CDH13-208ENST00000566333 CDC5LQ99459 802 aaKnown RBP10.22□□□□□ -0.77
CDH13-208ENST00000566333 CHMP3Q9Y3E7 222 aa10.22□□□□□ -0.77
CDH13-208ENST00000566333 ANKRD18BA2A2Z9 1011 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 NFKBIEO00221 500 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 C21orf2O43822 256 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 RPS8P62241 208 aaKnown RBP10.21□□□□□ -0.77
CDH13-208ENST00000566333 PTPN12Q05209 780 aaKnown RBP10.21□□□□□ -0.77
CDH13-208ENST00000566333 POLA2Q14181 598 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 ANKRD18AQ8IVF6 992 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 EXOC6Q8TAG9 804 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 SSH3Q8TE77 659 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 PUS3Q9BZE2 481 aaKnown RBP10.21□□□□□ -0.77
CDH13-208ENST00000566333 HDAC5Q9UQL6 1122 aa10.21□□□□□ -0.77
CDH13-208ENST00000566333 ATP6V0A2Q9Y487 856 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms