RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 MRFAP1L1Q96HT8 127 aa13.29□□□□□ -0.28
UBFD1-205ENST00000566136 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
UBFD1-205ENST00000566136 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
UBFD1-205ENST00000566136 NWD1Q149M9 1564 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 PTGER2P43116 358 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
UBFD1-205ENST00000566136 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 ARMC5Q96C12 935 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 PPCSQ9HAB8 311 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 SORBS3O60504 671 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
UBFD1-205ENST00000566136 SRPK1Q96SB4 655 aaKnown RBP13.28□□□□□ -0.28
UBFD1-205ENST00000566136 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
UBFD1-205ENST00000566136 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.28
UBFD1-205ENST00000566136 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
UBFD1-205ENST00000566136 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.29
UBFD1-205ENST00000566136 ADGRG1Q9Y653 693 aa13.27□□□□□ -0.29
UBFD1-205ENST00000566136 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
UBFD1-205ENST00000566136 LZTS3O60299 673 aaPredicted RBP13.27□□□□□ -0.29
UBFD1-205ENST00000566136 LDHBP07195 334 aaKnown RBP13.27□□□□□ -0.29
UBFD1-205ENST00000566136 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.29
UBFD1-205ENST00000566136 C12orf49Q9H741 205 aa13.27□□□□□ -0.29
UBFD1-205ENST00000566136 TPX2Q9ULW0 747 aaKnown RBP13.27□□□□□ -0.29
UBFD1-205ENST00000566136 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
UBFD1-205ENST00000566136 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
UBFD1-205ENST00000566136 ENPP3O14638 875 aa13.26□□□□□ -0.29
UBFD1-205ENST00000566136 CD53P19397 219 aa13.26□□□□□ -0.29
UBFD1-205ENST00000566136 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
UBFD1-205ENST00000566136 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
UBFD1-205ENST00000566136 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
UBFD1-205ENST00000566136 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
UBFD1-205ENST00000566136 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
UBFD1-205ENST00000566136 ENOX1Q8TC92 643 aaKnown RBP13.25□□□□□ -0.29
UBFD1-205ENST00000566136 MRVI1Q9Y6F6 885 aa13.25□□□□□ -0.29
UBFD1-205ENST00000566136 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
UBFD1-205ENST00000566136 TERF1P54274 439 aa13.24□□□□□ -0.29
UBFD1-205ENST00000566136 NAA30Q147X3 362 aaPredicted RBP13.24□□□□□ -0.29
UBFD1-205ENST00000566136 DALRD3Q5D0E6 543 aaKnown RBP13.24□□□□□ -0.29
UBFD1-205ENST00000566136 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
UBFD1-205ENST00000566136 PTPRHQ9HD43 1115 aa13.24□□□□□ -0.29
UBFD1-205ENST00000566136 FAM135BQ49AJ0 1406 aa13.24□□□□□ -0.29
UBFD1-205ENST00000566136 MSH6P52701 1360 aa13.24□□□□□ -0.29
UBFD1-205ENST00000566136 TKFCQ3LXA3 575 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 C14orf80Q86SX3 495 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.23□□□□□ -0.29
UBFD1-205ENST00000566136 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 FBXO45P0C2W1 286 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
UBFD1-205ENST00000566136 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
UBFD1-205ENST00000566136 CFAP99D6REC4 459 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 NRDCO43847 1150 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
UBFD1-205ENST00000566136 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 NEUROD4Q9HD90 331 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 FOSP01100 380 aaPredicted RBP13.22□□□□□ -0.29
UBFD1-205ENST00000566136 CD46P15529 392 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 SERINC3Q13530 473 aa13.22□□□□□ -0.29
UBFD1-205ENST00000566136 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
UBFD1-205ENST00000566136 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 PTPRUQ92729 1446 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 EVI5O60447 810 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 KANK3Q6NY19 840 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 PDILTQ8N807 584 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 CTSHP09668 335 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.29
UBFD1-205ENST00000566136 DIP2AQ14689 1571 aa13.21□□□□□ -0.3
UBFD1-205ENST00000566136 KIF1BO60333 1816 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 ESYT3A0FGR9 886 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 BPNT1O95861 308 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 LIG1P18858 919 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 DEKP35659 375 aaKnown RBP13.2□□□□□ -0.3
UBFD1-205ENST00000566136 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 AS3MTQ9HBK9 375 aa13.2□□□□□ -0.3
UBFD1-205ENST00000566136 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 NRXN3Q9Y4C0 1643 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 LDHCP07864 332 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 RRM1P23921 792 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 PSMD2Q13200 908 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 LARP1Q6PKG0 1096 aaKnown RBP13.19□□□□□ -0.3
UBFD1-205ENST00000566136 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
UBFD1-205ENST00000566136 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
UBFD1-205ENST00000566136 LONRF1Q17RB8 773 aa13.18□□□□□ -0.3
UBFD1-205ENST00000566136 CXXC1Q9P0U4 656 aaPredicted RBP13.18□□□□□ -0.3
UBFD1-205ENST00000566136 EIF3AQ14152 1382 aaKnown RBP13.18□□□□□ -0.3
UBFD1-205ENST00000566136 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms