RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CIAO1O76071 339 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 SERPINB2P05120 415 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 TM4SF1P30408 202 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 IGHMBP2P38935 993 aaKnown RBP12.11□□□□□ -0.47
SF3B3-207ENST00000566095 FOXO4P98177 505 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 MYH3P11055 1940 aa12.11□□□□□ -0.47
SF3B3-207ENST00000566095 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-207ENST00000566095 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
SF3B3-207ENST00000566095 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
SF3B3-207ENST00000566095 CLASRPQ8N2M8 674 aaKnown RBP12.1□□□□□ -0.47
SF3B3-207ENST00000566095 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
SF3B3-207ENST00000566095 KAZALD1Q96I82 304 aa12.1□□□□□ -0.47
SF3B3-207ENST00000566095 BACH2Q9BYV9 841 aa12.1□□□□□ -0.47
SF3B3-207ENST00000566095 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-207ENST00000566095 ITGA6P23229 1130 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 POLD1P28340 1107 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 PDE6BP35913 854 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
SF3B3-207ENST00000566095 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 MPHOSPH8Q99549 860 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 TMX4Q9H1E5 349 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-207ENST00000566095 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
SF3B3-207ENST00000566095 POLRMTO00411 1230 aaKnown RBP12.08□□□□□ -0.48
SF3B3-207ENST00000566095 MMP10P09238 476 aa12.08□□□□□ -0.48
SF3B3-207ENST00000566095 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-207ENST00000566095 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
SF3B3-207ENST00000566095 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
SF3B3-207ENST00000566095 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
SF3B3-207ENST00000566095 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-207ENST00000566095 RPGRQ92834 1020 aaKnown RBP12.08□□□□□ -0.48
SF3B3-207ENST00000566095 RBM17Q96I25 401 aaKnown RBP12.08□□□□□ -0.48
SF3B3-207ENST00000566095 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
SF3B3-207ENST00000566095 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
SF3B3-207ENST00000566095 EYA2O00167 538 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
SF3B3-207ENST00000566095 BMP2KLQ5H9B9 411 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 PRR5LQ6MZQ0 368 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 RHPN1Q8TCX5 695 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 CNNM1Q9NRU3 951 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
SF3B3-207ENST00000566095 IFIT2P09913 472 aaKnown RBP12.06□□□□□ -0.48
SF3B3-207ENST00000566095 PDE4AP27815 886 aa12.06□□□□□ -0.48
SF3B3-207ENST00000566095 SMIM5Q71RC9 77 aa12.06□□□□□ -0.48
SF3B3-207ENST00000566095 MTFR1LQ9H019 292 aa12.06□□□□□ -0.48
SF3B3-207ENST00000566095 GREM2Q9H772 168 aa12.06□□□□□ -0.48
SF3B3-207ENST00000566095 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
SF3B3-207ENST00000566095 AOX1Q06278 1338 aa12.06□□□□□ -0.48
SF3B3-207ENST00000566095 APBB1O00213 710 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 ERC2O15083 957 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 RFX5P48382 616 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-207ENST00000566095 TICAM2Q86XR7 235 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 SIL1Q9H173 461 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
SF3B3-207ENST00000566095 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
SF3B3-207ENST00000566095 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
SF3B3-207ENST00000566095 DDR1Q08345 913 aa12.04□□□□□ -0.48
SF3B3-207ENST00000566095 METTL24Q5JXM2 366 aa12.04□□□□□ -0.48
SF3B3-207ENST00000566095 ANKRD2Q9GZV1 360 aa12.04□□□□□ -0.48
SF3B3-207ENST00000566095 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-207ENST00000566095 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
SF3B3-207ENST00000566095 RBM19Q9Y4C8 960 aaKnown RBP12.04□□□□□ -0.48
SF3B3-207ENST00000566095 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 H0YIN7 160 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 BBOX1O75936 387 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 NPR1P16066 1061 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 RGS3P49796 1198 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 RPS8P62241 208 aaKnown RBP12.03□□□□□ -0.48
SF3B3-207ENST00000566095 GRAPQ13588 217 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 MSL1Q68DK7 614 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 GRAPLQ8TC17 118 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-207ENST00000566095 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-207ENST00000566095 CRAMP1Q96RY5 1269 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
SF3B3-207ENST00000566095 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-207ENST00000566095 MX1P20591 662 aa12.02□□□□□ -0.49
SF3B3-207ENST00000566095 GORABQ5T7V8 394 aa12.02□□□□□ -0.49
SF3B3-207ENST00000566095 AACSQ86V21 672 aa12.02□□□□□ -0.49
SF3B3-207ENST00000566095 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
SF3B3-207ENST00000566095 EPB41L2O43491 1005 aaKnown RBP12.01□□□□□ -0.49
SF3B3-207ENST00000566095 IFIT1P09914 478 aaKnown RBP12.01□□□□□ -0.49
SF3B3-207ENST00000566095 SLC5A1P13866 664 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-207ENST00000566095 R3HDM1Q15032 1099 aaKnown RBP12.01□□□□□ -0.49
SF3B3-207ENST00000566095 PUM3Q15397 648 aaKnown RBP12.01□□□□□ -0.49
SF3B3-207ENST00000566095 C8orf34Q49A92 452 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms