RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 UTYO14607 1347 aa26.64■■□□□ 1.86
SHCBP1-205ENST00000566016 CCT4P50991 539 aaKnown RBP26.64■■□□□ 1.86
SHCBP1-205ENST00000566016 CTSWP56202 376 aa26.64■■□□□ 1.86
SHCBP1-205ENST00000566016 CCDC152Q4G0S7 254 aa26.64■■□□□ 1.86
SHCBP1-205ENST00000566016 ARHGAP27Q6ZUM4 889 aa26.64■■□□□ 1.86
SHCBP1-205ENST00000566016 CCDC88AQ3V6T2 1871 aa26.64■■□□□ 1.85
SHCBP1-205ENST00000566016 GRAPQ13588 217 aa26.63■■□□□ 1.85
SHCBP1-205ENST00000566016 CC2D2BQ6DHV5 1058 aa26.63■■□□□ 1.85
SHCBP1-205ENST00000566016 ATF7IPQ6VMQ6 1270 aa26.63■■□□□ 1.85
SHCBP1-205ENST00000566016 GRAPLQ8TC17 118 aaPredicted RBP26.63■■□□□ 1.85
SHCBP1-205ENST00000566016 LTBP3Q9NS15 1303 aa26.63■■□□□ 1.85
SHCBP1-205ENST00000566016 BBOX1O75936 387 aa26.62■■□□□ 1.85
SHCBP1-205ENST00000566016 CCDC93Q567U6 631 aa26.62■■□□□ 1.85
SHCBP1-205ENST00000566016 TMC4Q7Z404 712 aa26.62■■□□□ 1.85
SHCBP1-205ENST00000566016 C9orf78Q9NZ63 289 aaPredicted RBP26.62■■□□□ 1.85
SHCBP1-205ENST00000566016 DICER1Q9UPY3 1922 aaKnown RBP26.62■■□□□ 1.85
SHCBP1-205ENST00000566016 PPEF1O14829 653 aaPredicted RBP26.62■■□□□ 1.85
SHCBP1-205ENST00000566016 TRIM27P14373 513 aa26.61■■□□□ 1.85
SHCBP1-205ENST00000566016 GRIPAP1Q4V328 841 aa26.61■■□□□ 1.85
SHCBP1-205ENST00000566016 TTLL11Q8NHH1 800 aa26.61■■□□□ 1.85
SHCBP1-205ENST00000566016 COL4A1P02462 1669 aa26.6■■□□□ 1.85
SHCBP1-205ENST00000566016 NFKBIEO00221 500 aa26.6■■□□□ 1.85
SHCBP1-205ENST00000566016 ZKSCAN2Q63HK3 967 aa26.6■■□□□ 1.85
SHCBP1-205ENST00000566016 RTKN2Q8IZC4 609 aa26.59■■□□□ 1.85
SHCBP1-205ENST00000566016 FRAT1Q92837 279 aaPredicted RBP26.59■■□□□ 1.85
SHCBP1-205ENST00000566016 YTHDC1Q96MU7 727 aaKnown RBP26.59■■□□□ 1.85
SHCBP1-205ENST00000566016 ATP6V0A2Q9Y487 856 aa26.59■■□□□ 1.85
SHCBP1-205ENST00000566016 CSF1RP07333 972 aa26.58■■□□□ 1.85
SHCBP1-205ENST00000566016 INTS3Q68E01 1043 aaKnown RBP26.58■■□□□ 1.85
SHCBP1-205ENST00000566016 ZNF219Q9P2Y4 722 aaPredicted RBP26.58■■□□□ 1.85
SHCBP1-205ENST00000566016 USP44Q9H0E7 712 aa26.57■■□□□ 1.84
SHCBP1-205ENST00000566016 TAOK3Q9H2K8 898 aa26.57■■□□□ 1.84
SHCBP1-205ENST00000566016 SPEF2Q9C093 1822 aa26.57■■□□□ 1.84
SHCBP1-205ENST00000566016 NBPF7P0C2Y1 421 aaPredicted RBP26.56■■□□□ 1.84
SHCBP1-205ENST00000566016 CELF1Q92879 486 aaKnown RBP26.56■■□□□ 1.84
SHCBP1-205ENST00000566016 RCAN3Q9UKA8 241 aa26.56■■□□□ 1.84
SHCBP1-205ENST00000566016 FOXO4P98177 505 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 SP8Q8IXZ3 490 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 TMX4Q9H1E5 349 aaPredicted RBP26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 LTBP1Q14766 1721 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 TIAM2Q8IVF5 1701 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 LMNB1P20700 586 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 RPS8P62241 208 aaKnown RBP26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 RASSF7Q02833 373 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 CDC5LQ99459 802 aaKnown RBP26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 PSMD1Q99460 953 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 GREM2Q9H772 168 aa26.55■■□□□ 1.84
SHCBP1-205ENST00000566016 FKBP4Q02790 459 aaKnown RBP eCLIP26.54■■□□□ 1.84
SHCBP1-205ENST00000566016 OLFM4Q6UX06 510 aa26.54■■□□□ 1.84
SHCBP1-205ENST00000566016 SEC31BQ9NQW1 1179 aa26.54■■□□□ 1.84
SHCBP1-205ENST00000566016 YY1P25490 414 aa26.52■■□□□ 1.84
SHCBP1-205ENST00000566016 KAZALD1Q96I82 304 aa26.52■■□□□ 1.84
SHCBP1-205ENST00000566016 SUCLG2Q96I99 432 aa26.52■■□□□ 1.84
SHCBP1-205ENST00000566016 CCDC85AQ96PX6 553 aaPredicted RBP26.52■■□□□ 1.84
SHCBP1-205ENST00000566016 ZC3H4Q9UPT8 1303 aaKnown RBP26.52■■□□□ 1.84
SHCBP1-205ENST00000566016 FAM161AQ3B820 660 aa26.51■■□□□ 1.83
SHCBP1-205ENST00000566016 ANKRD18AQ8IVF6 992 aa26.51■■□□□ 1.83
SHCBP1-205ENST00000566016 ITGA6P23229 1130 aa26.5■■□□□ 1.83
SHCBP1-205ENST00000566016 RABL6Q3YEC7 729 aaPredicted RBP26.5■■□□□ 1.83
SHCBP1-205ENST00000566016 EPHA10Q5JZY3 1008 aa26.5■■□□□ 1.83
SHCBP1-205ENST00000566016 DUOX1Q9NRD9 1551 aa26.5■■□□□ 1.83
SHCBP1-205ENST00000566016 PRELPP51888 382 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 C9orf131Q5VYM1 1079 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 LMBR1LQ6UX01 489 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 CLUAP1Q96AJ1 413 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 HDAC5Q9UQL6 1122 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 TNNQ9UQP3 1299 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 FTSJ3Q8IY81 847 aaKnown RBP26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 DZIP1LQ8IYY4 767 aaKnown RBP26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 RTFDC1Q9BY42 306 aaPredicted RBP26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 RNF181Q9P0P0 153 aa26.49■■□□□ 1.83
SHCBP1-205ENST00000566016 UBTFL1P0CB47 393 aaPredicted RBP26.48■■□□□ 1.83
SHCBP1-205ENST00000566016 SLC51AQ86UW1 340 aa26.48■■□□□ 1.83
SHCBP1-205ENST00000566016 BICC1Q9H694 974 aaKnown RBP26.48■■□□□ 1.83
SHCBP1-205ENST00000566016 BSDC1Q9NW68 430 aaPredicted RBP26.48■■□□□ 1.83
SHCBP1-205ENST00000566016 IFIT5Q13325 482 aaKnown RBP26.47■■□□□ 1.83
SHCBP1-205ENST00000566016 A0A1B0GUL6 1792 aa26.46■■□□□ 1.83
SHCBP1-205ENST00000566016 ANKRD18BA2A2Z9 1011 aa26.46■■□□□ 1.83
SHCBP1-205ENST00000566016 GNAI3P08754 354 aa26.46■■□□□ 1.83
SHCBP1-205ENST00000566016 MS4A1P11836 297 aa26.46■■□□□ 1.83
SHCBP1-205ENST00000566016 MPNDQ8N594 471 aa26.46■■□□□ 1.83
SHCBP1-205ENST00000566016 TMEM57Q8N5G2 664 aa26.46■■□□□ 1.83
SHCBP1-205ENST00000566016 IGHMBP2P38935 993 aaKnown RBP26.45■■□□□ 1.82
SHCBP1-205ENST00000566016 DPP8Q6V1X1 898 aaPredicted RBP26.45■■□□□ 1.82
SHCBP1-205ENST00000566016 ANKRD44Q8N8A2 993 aa26.45■■□□□ 1.82
SHCBP1-205ENST00000566016 SUPT20HQ8NEM7 779 aa26.45■■□□□ 1.82
SHCBP1-205ENST00000566016 MEIS3Q99687 375 aa26.45■■□□□ 1.82
SHCBP1-205ENST00000566016 VPS33BQ9H267 617 aa26.45■■□□□ 1.82
SHCBP1-205ENST00000566016 CCDC57Q2TAC2 916 aa26.44■■□□□ 1.82
SHCBP1-205ENST00000566016 PODXL2Q9NZ53 605 aa26.44■■□□□ 1.82
SHCBP1-205ENST00000566016 CHMP3Q9Y3E7 222 aa26.44■■□□□ 1.82
SHCBP1-205ENST00000566016 RLBP1P12271 317 aa26.43■■□□□ 1.82
SHCBP1-205ENST00000566016 IARSP41252 1262 aaKnown RBP26.43■■□□□ 1.82
SHCBP1-205ENST00000566016 ZNF277Q9NRM2 450 aaPredicted RBP26.43■■□□□ 1.82
SHCBP1-205ENST00000566016 MPHOSPH8Q99549 860 aa26.42■■□□□ 1.82
SHCBP1-205ENST00000566016 XDHP47989 1333 aa26.41■■□□□ 1.82
SHCBP1-205ENST00000566016 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.41■■□□□ 1.82
SHCBP1-205ENST00000566016 NSFL1CQ9UNZ2 370 aaKnown RBP26.41■■□□□ 1.82
SHCBP1-205ENST00000566016 GPSM2P81274 684 aa26.4■■□□□ 1.82
SHCBP1-205ENST00000566016 MINPP1Q9UNW1 487 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms