RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 GRM8O00222 908 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 TAOK3Q9H2K8 898 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 RNF181Q9P0P0 153 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 SBF1O95248 1867 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 TAF1P21675 1872 aa16.29■□□□□ 0.2
PDXDC1-212ENST00000565986 BBOX1O75936 387 aa16.28■□□□□ 0.2
PDXDC1-212ENST00000565986 LMNB1P20700 586 aa16.28■□□□□ 0.2
PDXDC1-212ENST00000565986 CASP7P55210 303 aa16.28■□□□□ 0.2
PDXDC1-212ENST00000565986 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
PDXDC1-212ENST00000565986 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
PDXDC1-212ENST00000565986 RTKN2Q8IZC4 609 aa16.28■□□□□ 0.2
PDXDC1-212ENST00000565986 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.2
PDXDC1-212ENST00000565986 TMC4Q7Z404 712 aa16.27■□□□□ 0.2
PDXDC1-212ENST00000565986 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
PDXDC1-212ENST00000565986 PLA2G12BQ9BX93 195 aa16.27■□□□□ 0.2
PDXDC1-212ENST00000565986 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.2
PDXDC1-212ENST00000565986 LRRC37AA6NMS7 1700 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 BCAR3O75815 825 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 CCT4P50991 539 aaKnown RBP16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 CCDC88AQ3V6T2 1871 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
PDXDC1-212ENST00000565986 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
PDXDC1-212ENST00000565986 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
PDXDC1-212ENST00000565986 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
PDXDC1-212ENST00000565986 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
PDXDC1-212ENST00000565986 COL4A1P02462 1669 aa16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 GREM2Q9H772 168 aa16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
PDXDC1-212ENST00000565986 DICER1Q9UPY3 1922 aaKnown RBP16.23■□□□□ 0.19
PDXDC1-212ENST00000565986 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
PDXDC1-212ENST00000565986 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
PDXDC1-212ENST00000565986 ATF7IPQ6VMQ6 1270 aa16.23■□□□□ 0.19
PDXDC1-212ENST00000565986 ANKRD18AQ8IVF6 992 aa16.23■□□□□ 0.19
PDXDC1-212ENST00000565986 PSMD1Q99460 953 aa16.23■□□□□ 0.19
PDXDC1-212ENST00000565986 UTYO14607 1347 aa16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 SPEF2Q9C093 1822 aa16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 TRIM27P14373 513 aa16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 PRELPP51888 382 aa16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 ZKSCAN2Q63HK3 967 aa16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 ZNF784Q8NCA9 323 aaPredicted RBP16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 ZNF277Q9NRM2 450 aaPredicted RBP16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
PDXDC1-212ENST00000565986 CSF1RP07333 972 aa16.21■□□□□ 0.19
PDXDC1-212ENST00000565986 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
PDXDC1-212ENST00000565986 ITGA6P23229 1130 aa16.21■□□□□ 0.19
PDXDC1-212ENST00000565986 FOXO4P98177 505 aa16.21■□□□□ 0.19
PDXDC1-212ENST00000565986 MPNDQ8N594 471 aa16.21■□□□□ 0.19
PDXDC1-212ENST00000565986 SUCLG2Q96I99 432 aa16.21■□□□□ 0.19
PDXDC1-212ENST00000565986 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 LMBR1LQ6UX01 489 aa16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 SUPT20HQ8NEM7 779 aa16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
PDXDC1-212ENST00000565986 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 ANKRD18BA2A2Z9 1011 aa16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 RCAN3Q9UKA8 241 aa16.19■□□□□ 0.18
PDXDC1-212ENST00000565986 CCDC57Q2TAC2 916 aa16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 GPBP1L1Q9HC44 474 aaPredicted RBP16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 LTBP1Q14766 1721 aa16.18■□□□□ 0.18
PDXDC1-212ENST00000565986 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 GPSM2P81274 684 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 LARGE2Q8N3Y3 721 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 BSDC1Q9NW68 430 aaPredicted RBP16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 ANKIB1Q9P2G1 1089 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 HDAC5Q9UQL6 1122 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
PDXDC1-212ENST00000565986 C6orf229H3BNL8 230 aa16.16■□□□□ 0.18
PDXDC1-212ENST00000565986 AOC3Q16853 763 aa16.16■□□□□ 0.18
PDXDC1-212ENST00000565986 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
PDXDC1-212ENST00000565986 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
PDXDC1-212ENST00000565986 XDHP47989 1333 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms