RNA–Protein interactions for RNA: ENST00000565954.1

CCDC187-202, Transcript of coiled-coil domain containing 187, humanhuman

TSL 2

Gene CCDC187, Length 1,802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-202ENST00000565954 PDE4AP27815 886 aa23.75■■□□□ 1.39
CCDC187-202ENST00000565954 PTPN12Q05209 780 aaKnown RBP23.75■■□□□ 1.39
CCDC187-202ENST00000565954 TPTE2Q6XPS3 522 aa23.75■■□□□ 1.39
CCDC187-202ENST00000565954 NOP58Q9Y2X3 529 aaKnown RBP23.75■■□□□ 1.39
CCDC187-202ENST00000565954 NPHP1O15259 732 aa23.75■■□□□ 1.39
CCDC187-202ENST00000565954 LRRCC1Q9C099 1032 aa23.75■■□□□ 1.39
CCDC187-202ENST00000565954 GREM2Q9H772 168 aa23.74■■□□□ 1.39
CCDC187-202ENST00000565954 TM4SF1P30408 202 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 CCDC57Q2TAC2 916 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 HSP90AB4PQ58FF6 505 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 ZNF594Q96JF6 807 aaPredicted RBP23.73■■□□□ 1.39
CCDC187-202ENST00000565954 LAMB2P55268 1798 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 RAB11FIP3O75154 756 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 G3BP1Q13283 466 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC187-202ENST00000565954 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
CCDC187-202ENST00000565954 COPRSQ9NQ92 184 aa23.73■■□□□ 1.39
CCDC187-202ENST00000565954 HSP90B1P14625 803 aaKnown RBP23.72■■□□□ 1.39
CCDC187-202ENST00000565954 IFIT5Q13325 482 aaKnown RBP23.72■■□□□ 1.39
CCDC187-202ENST00000565954 MSL1Q68DK7 614 aa23.72■■□□□ 1.39
CCDC187-202ENST00000565954 C16orf71Q8IYS4 520 aaPredicted RBP23.72■■□□□ 1.39
CCDC187-202ENST00000565954 NLGN1Q8N2Q7 840 aa23.72■■□□□ 1.39
CCDC187-202ENST00000565954 IL1RAPL2Q9NP60 686 aa23.72■■□□□ 1.39
CCDC187-202ENST00000565954 ITGA6P23229 1130 aa23.71■■□□□ 1.39
CCDC187-202ENST00000565954 DDR1Q08345 913 aa23.71■■□□□ 1.39
CCDC187-202ENST00000565954 RHPN1Q8TCX5 695 aa23.71■■□□□ 1.39
CCDC187-202ENST00000565954 SERPINB2P05120 415 aa23.7■■□□□ 1.39
CCDC187-202ENST00000565954 C3orf67Q6ZVT6 689 aa23.7■■□□□ 1.39
CCDC187-202ENST00000565954 CNBD1Q8NA66 436 aa23.7■■□□□ 1.39
CCDC187-202ENST00000565954 KIF1BPQ96EK5 621 aa23.7■■□□□ 1.38
CCDC187-202ENST00000565954 QSER1Q2KHR3 1735 aa23.69■■□□□ 1.38
CCDC187-202ENST00000565954 POLRMTO00411 1230 aaKnown RBP23.69■■□□□ 1.38
CCDC187-202ENST00000565954 TAF7LQ5H9L4 462 aa23.69■■□□□ 1.38
CCDC187-202ENST00000565954 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
CCDC187-202ENST00000565954 ANKRD18BA2A2Z9 1011 aa23.68■■□□□ 1.38
CCDC187-202ENST00000565954 OTUD7AQ8TE49 926 aaPredicted RBP23.68■■□□□ 1.38
CCDC187-202ENST00000565954 PDGFDQ9GZP0 370 aaPredicted RBP23.68■■□□□ 1.38
CCDC187-202ENST00000565954 SASH1O94885 1247 aa23.68■■□□□ 1.38
CCDC187-202ENST00000565954 CCDC152Q4G0S7 254 aa23.68■■□□□ 1.38
CCDC187-202ENST00000565954 PRR5LQ6MZQ0 368 aa23.68■■□□□ 1.38
CCDC187-202ENST00000565954 ERC1Q8IUD2 1116 aa23.68■■□□□ 1.38
CCDC187-202ENST00000565954 CASZ1Q86V15 1759 aa23.68■■□□□ 1.38
CCDC187-202ENST00000565954 PUS3Q9BZE2 481 aaKnown RBP23.67■■□□□ 1.38
CCDC187-202ENST00000565954 SEC31BQ9NQW1 1179 aa23.67■■□□□ 1.38
CCDC187-202ENST00000565954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.67■■□□□ 1.38
CCDC187-202ENST00000565954 LRRC24Q50LG9 513 aa23.66■■□□□ 1.38
CCDC187-202ENST00000565954 NLRP3Q96P20 1036 aa23.66■■□□□ 1.38
CCDC187-202ENST00000565954 MMP10P09238 476 aa23.66■■□□□ 1.38
CCDC187-202ENST00000565954 EYA2O00167 538 aa23.65■■□□□ 1.38
CCDC187-202ENST00000565954 ATG9AQ7Z3C6 839 aa23.65■■□□□ 1.38
CCDC187-202ENST00000565954 SF3B3Q15393 1217 aaKnown RBP23.64■■□□□ 1.38
CCDC187-202ENST00000565954 TNRC6CQ9HCJ0 1690 aaKnown RBP23.64■■□□□ 1.37
CCDC187-202ENST00000565954 ST5P78524 1137 aa23.63■■□□□ 1.37
CCDC187-202ENST00000565954 TFCP2Q12800 502 aa23.63■■□□□ 1.37
CCDC187-202ENST00000565954 PLEKHM2Q8IWE5 1019 aa23.63■■□□□ 1.37
CCDC187-202ENST00000565954 LDHAL6AQ6ZMR3 332 aa23.63■■□□□ 1.37
CCDC187-202ENST00000565954 PARP3Q9Y6F1 533 aa23.63■■□□□ 1.37
CCDC187-202ENST00000565954 CIAO1O76071 339 aa23.62■■□□□ 1.37
CCDC187-202ENST00000565954 CLASRPQ8N2M8 674 aaKnown RBP23.62■■□□□ 1.37
CCDC187-202ENST00000565954 IL15P40933 162 aaPredicted RBP23.61■■□□□ 1.37
CCDC187-202ENST00000565954 RTL9Q8NET4 1388 aa23.61■■□□□ 1.37
CCDC187-202ENST00000565954 TAF1P21675 1872 aa23.61■■□□□ 1.37
CCDC187-202ENST00000565954 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
CCDC187-202ENST00000565954 SPEF2Q9C093 1822 aa23.6■■□□□ 1.37
CCDC187-202ENST00000565954 COL4A1P02462 1669 aa23.6■■□□□ 1.37
CCDC187-202ENST00000565954 AACSQ86V21 672 aa23.59■■□□□ 1.37
CCDC187-202ENST00000565954 FBXO3Q9UK99 471 aa23.59■■□□□ 1.37
CCDC187-202ENST00000565954 TSHZ3Q63HK5 1081 aa23.59■■□□□ 1.37
CCDC187-202ENST00000565954 EAF2Q96CJ1 260 aaPredicted RBP23.59■■□□□ 1.37
CCDC187-202ENST00000565954 MPHOSPH8Q99549 860 aa23.59■■□□□ 1.37
CCDC187-202ENST00000565954 RIPOR2Q9Y4F9 1068 aa23.59■■□□□ 1.37
CCDC187-202ENST00000565954 MX1P20591 662 aa23.58■■□□□ 1.37
CCDC187-202ENST00000565954 IGHMBP2P38935 993 aaKnown RBP23.58■■□□□ 1.37
CCDC187-202ENST00000565954 CDC5LQ99459 802 aaKnown RBP23.58■■□□□ 1.37
CCDC187-202ENST00000565954 NRXN2Q9P2S2 1712 aa23.58■■□□□ 1.36
CCDC187-202ENST00000565954 SALL3Q9BXA9 1300 aa23.58■■□□□ 1.36
CCDC187-202ENST00000565954 IFIT2P09913 472 aaKnown RBP23.57■■□□□ 1.36
CCDC187-202ENST00000565954 PDE1AP54750 535 aa23.57■■□□□ 1.36
CCDC187-202ENST00000565954 CCDC8Q9H0W5 538 aaPredicted RBP23.57■■□□□ 1.36
CCDC187-202ENST00000565954 RIC1Q4ADV7 1423 aa23.57■■□□□ 1.36
CCDC187-202ENST00000565954 TNNI3KQ59H18 835 aa23.56■■□□□ 1.36
CCDC187-202ENST00000565954 CEP126Q9P2H0 1117 aa23.56■■□□□ 1.36
CCDC187-202ENST00000565954 FPGT-TNNI3KV9GXZ4 949 aa23.56■■□□□ 1.36
CCDC187-202ENST00000565954 LRP5O75197 1615 aa23.56■■□□□ 1.36
CCDC187-202ENST00000565954 METTL24Q5JXM2 366 aa23.56■■□□□ 1.36
CCDC187-202ENST00000565954 DDX46Q7L014 1031 aaKnown RBP23.56■■□□□ 1.36
CCDC187-202ENST00000565954 ANKRD18AQ8IVF6 992 aa23.56■■□□□ 1.36
CCDC187-202ENST00000565954 CELF1Q92879 486 aaKnown RBP23.56■■□□□ 1.36
CCDC187-202ENST00000565954 TLR7Q9NYK1 1049 aaKnown RBP23.56■■□□□ 1.36
CCDC187-202ENST00000565954 R3HDM1Q15032 1099 aaKnown RBP23.55■■□□□ 1.36
CCDC187-202ENST00000565954 ANKRD31Q8N7Z5 1873 aa23.54■■□□□ 1.36
CCDC187-202ENST00000565954 SLC16A10Q8TF71 515 aa23.54■■□□□ 1.36
CCDC187-202ENST00000565954 RPGRQ92834 1020 aaKnown RBP23.54■■□□□ 1.36
CCDC187-202ENST00000565954 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
CCDC187-202ENST00000565954 HELBQ8NG08 1087 aaPredicted RBP23.53■■□□□ 1.36
CCDC187-202ENST00000565954 BRIP1Q9BX63 1249 aa23.53■■□□□ 1.36
CCDC187-202ENST00000565954 TIMM10P62072 90 aa23.52■■□□□ 1.36
CCDC187-202ENST00000565954 TTC22Q5TAA0 569 aa23.52■■□□□ 1.36
CCDC187-202ENST00000565954 NEUROD6Q96NK8 337 aa23.52■■□□□ 1.36
CCDC187-202ENST00000565954 OSBPL3Q9H4L5 887 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms