RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 MAP3K13O43283 966 aa12.72□□□□□ -0.37
CNOT1-208ENST00000565697 TRIM28Q13263 835 aaKnown RBP12.72□□□□□ -0.37
CNOT1-208ENST00000565697 CCDC93Q567U6 631 aa12.72□□□□□ -0.37
CNOT1-208ENST00000565697 ISCA1Q9BUE6 129 aa12.72□□□□□ -0.37
CNOT1-208ENST00000565697 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
CNOT1-208ENST00000565697 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
CNOT1-208ENST00000565697 SBF1O95248 1867 aa12.72□□□□□ -0.37
CNOT1-208ENST00000565697 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
CNOT1-208ENST00000565697 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
CNOT1-208ENST00000565697 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-208ENST00000565697 RASSF7Q02833 373 aa12.71□□□□□ -0.37
CNOT1-208ENST00000565697 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
CNOT1-208ENST00000565697 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
CNOT1-208ENST00000565697 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
CNOT1-208ENST00000565697 ZNF526Q8TF50 670 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-208ENST00000565697 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
CNOT1-208ENST00000565697 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-208ENST00000565697 SLX4Q8IY92 1834 aa12.71□□□□□ -0.38
CNOT1-208ENST00000565697 GOLGB1Q14789 3259 aaKnown RBP12.7□□□□□ -0.38
CNOT1-208ENST00000565697 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
CNOT1-208ENST00000565697 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
CNOT1-208ENST00000565697 NFKBIEO00221 500 aa12.7□□□□□ -0.38
CNOT1-208ENST00000565697 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
CNOT1-208ENST00000565697 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
CNOT1-208ENST00000565697 VAMP4O75379 141 aa12.69□□□□□ -0.38
CNOT1-208ENST00000565697 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
CNOT1-208ENST00000565697 NEXNQ0ZGT2 675 aa12.69□□□□□ -0.38
CNOT1-208ENST00000565697 KSR2Q6VAB6 950 aa12.69□□□□□ -0.38
CNOT1-208ENST00000565697 MYD88Q99836 296 aa12.69□□□□□ -0.38
CNOT1-208ENST00000565697 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-208ENST00000565697 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
CNOT1-208ENST00000565697 FER1L6Q2WGJ9 1857 aa12.69□□□□□ -0.38
CNOT1-208ENST00000565697 TTLL13PA6NNM8 815 aa12.68□□□□□ -0.38
CNOT1-208ENST00000565697 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
CNOT1-208ENST00000565697 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
CNOT1-208ENST00000565697 CCDC191Q8NCU4 936 aa12.68□□□□□ -0.38
CNOT1-208ENST00000565697 CACNA1FO60840 1977 aa12.68□□□□□ -0.38
CNOT1-208ENST00000565697 ZNF521Q96K83 1311 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 PI4KAP2A4QPH2 592 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-208ENST00000565697 ST18O60284 1047 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 HCLS1P14317 486 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-208ENST00000565697 C1QTNF8P60827 252 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 DIEXFQ68CQ4 756 aaKnown RBP12.67□□□□□ -0.38
CNOT1-208ENST00000565697 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
CNOT1-208ENST00000565697 PI4KAP1Q8N8J0 262 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 ZBTB38Q8NAP3 1195 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-208ENST00000565697 CWC25Q9NXE8 425 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-208ENST00000565697 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
CNOT1-208ENST00000565697 E9PSI1 815 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
CNOT1-208ENST00000565697 BBOX1O75936 387 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 FLIIQ13045 1269 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 IER5LQ5T953 404 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 TMC4Q7Z404 712 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 FAM89AQ96GI7 184 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 PSMD1Q99460 953 aa12.66□□□□□ -0.38
CNOT1-208ENST00000565697 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 GLTPD2A6NH11 291 aa12.65□□□□□ -0.38
CNOT1-208ENST00000565697 IRS4O14654 1257 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 PCCAP05165 728 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 PRELPP51888 382 aa12.65□□□□□ -0.38
CNOT1-208ENST00000565697 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 GRAPQ13588 217 aa12.65□□□□□ -0.38
CNOT1-208ENST00000565697 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
CNOT1-208ENST00000565697 GRAPLQ8TC17 118 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-208ENST00000565697 ABCC4O15439 1325 aa12.64□□□□□ -0.39
CNOT1-208ENST00000565697 KIF3CO14782 793 aa12.64□□□□□ -0.39
CNOT1-208ENST00000565697 G2E3Q7L622 706 aa12.64□□□□□ -0.39
CNOT1-208ENST00000565697 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
CNOT1-208ENST00000565697 ATP6V0A2Q9Y487 856 aa12.64□□□□□ -0.39
CNOT1-208ENST00000565697 TIAM2Q8IVF5 1701 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 TOMM70O94826 608 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
CNOT1-208ENST00000565697 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CNOT1-208ENST00000565697 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 JDP2Q8WYK2 163 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 LAMB2P55268 1798 aa12.63□□□□□ -0.39
CNOT1-208ENST00000565697 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
CNOT1-208ENST00000565697 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
CNOT1-208ENST00000565697 PDE8AO60658 829 aa12.62□□□□□ -0.39
CNOT1-208ENST00000565697 RRAGCQ9HB90 399 aa12.62□□□□□ -0.39
CNOT1-208ENST00000565697 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-208ENST00000565697 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
CNOT1-208ENST00000565697 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
CNOT1-208ENST00000565697 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-208ENST00000565697 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
CNOT1-208ENST00000565697 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
CNOT1-208ENST00000565697 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms