RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 NYXQ9GZU5 481 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 COPRSQ9NQ92 184 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 CSF1RP07333 972 aa11.53□□□□□ -0.56
CNEP1R1-206ENST00000565556 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
CNEP1R1-206ENST00000565556 SRP68Q9UHB9 627 aaKnown RBP11.53□□□□□ -0.56
CNEP1R1-206ENST00000565556 CHMP3Q9Y3E7 222 aa11.53□□□□□ -0.56
CNEP1R1-206ENST00000565556 NTSR2O95665 410 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 BAG6P46379 1132 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 RFX5P48382 616 aaPredicted RBP11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 SMIM5Q71RC9 77 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 AMIGO3Q86WK7 504 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 AKT1S1Q96B36 256 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 TFCP2L1Q9NZI6 479 aa11.52□□□□□ -0.56
CNEP1R1-206ENST00000565556 LAMB2P55268 1798 aa11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 CTSWP56202 376 aa11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 PTPN12Q05209 780 aaKnown RBP11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 PA2G4Q9UQ80 394 aaKnown RBP11.52□□□□□ -0.57
CNEP1R1-206ENST00000565556 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
CNEP1R1-206ENST00000565556 IFIT5Q13325 482 aaKnown RBP11.51□□□□□ -0.57
CNEP1R1-206ENST00000565556 TPTE2Q6XPS3 522 aa11.51□□□□□ -0.57
CNEP1R1-206ENST00000565556 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
CNEP1R1-206ENST00000565556 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
CNEP1R1-206ENST00000565556 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
CNEP1R1-206ENST00000565556 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 ZBTB22O15209 634 aa11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 GTF2E1P29083 439 aaPredicted RBP11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 NBPF5PQ86XG9 351 aaPredicted RBP11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 PLEKHM2Q8IWE5 1019 aa11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 CLASRPQ8N2M8 674 aaKnown RBP11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 CHMP5Q9NZZ3 219 aa11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 CARMIL3Q8ND23 1372 aa11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
CNEP1R1-206ENST00000565556 ANKRD18BA2A2Z9 1011 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 CIAO1O76071 339 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 GYS1P13807 737 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 ZNF827Q17R98 1081 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 SLC10A5Q5PT55 438 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 SIL1Q9H173 461 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 RTL9Q8NET4 1388 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 MCM4P33991 863 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 IL15P40933 162 aaPredicted RBP11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 CCDC152Q4G0S7 254 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 C16orf71Q8IYS4 520 aaPredicted RBP11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 C22orf23Q9BZE7 217 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 OSBPL3Q9H4L5 887 aa11.49□□□□□ -0.57
CNEP1R1-206ENST00000565556 TUBGCP6Q96RT7 1819 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 AOX1Q06278 1338 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 GOLGA6L3A6NEY3 463 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 EYA2O00167 538 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 SASH1O94885 1247 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 ITGA6P23229 1130 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 NFIXQ14938 502 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 NUTM1Q86Y26 1132 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 IL1RAPL2Q9NP60 686 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 STAP2Q9UGK3 403 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 QSER1Q2KHR3 1735 aa11.48□□□□□ -0.57
CNEP1R1-206ENST00000565556 FSD2A1L4K1 749 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 MX1P20591 662 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 TM4SF1P30408 202 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 PDE1AP54750 535 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 COL23A1Q86Y22 540 aaPredicted RBP11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 HSCBQ8IWL3 235 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 NLGN1Q8N2Q7 840 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 GPATCH3Q96I76 525 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 GREM2Q9H772 168 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 SALL3Q9BXA9 1300 aa11.47□□□□□ -0.57
CNEP1R1-206ENST00000565556 NPHP1O15259 732 aa11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 MFAP1P55081 439 aaKnown RBP11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 SF3B3Q15393 1217 aaKnown RBP11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 SLC15A2Q16348 729 aa11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 GPR108Q9NPR9 543 aa11.46□□□□□ -0.57
CNEP1R1-206ENST00000565556 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 TTC22Q5TAA0 569 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 LDHAL6AQ6ZMR3 332 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 AACSQ86V21 672 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 CNBD1Q8NA66 436 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 CEP126Q9P2H0 1117 aa11.46□□□□□ -0.58
CNEP1R1-206ENST00000565556 RIC1Q4ADV7 1423 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms