RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FKBP1BP68106 108 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 RASAL3Q86YV0 1011 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 NGEFQ8N5V2 710 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 SLC17A8Q8NDX2 589 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 GPTP24298 496 aa12.12□□□□□ -0.47
VPS9D1-205ENST00000565452 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
VPS9D1-205ENST00000565452 TM4SF4P48230 202 aa12.12□□□□□ -0.47
VPS9D1-205ENST00000565452 KIF6Q6ZMV9 814 aa12.12□□□□□ -0.47
VPS9D1-205ENST00000565452 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
VPS9D1-205ENST00000565452 ABCC12Q96J65 1359 aa12.11□□□□□ -0.47
VPS9D1-205ENST00000565452 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
VPS9D1-205ENST00000565452 SLC10A5Q5PT55 438 aa12.11□□□□□ -0.47
VPS9D1-205ENST00000565452 SLC51AQ86UW1 340 aa12.11□□□□□ -0.47
VPS9D1-205ENST00000565452 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
VPS9D1-205ENST00000565452 MAP3K15Q6ZN16 1313 aa12.11□□□□□ -0.47
VPS9D1-205ENST00000565452 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 PSMD14O00487 310 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 WASHC4Q2M389 1173 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 CDCA5Q96FF9 252 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
VPS9D1-205ENST00000565452 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 EGFRP00533 1210 aa12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 C3orf67Q6ZVT6 689 aa12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
VPS9D1-205ENST00000565452 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 NTSR2O95665 410 aa12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 SREBF2Q12772 1141 aa12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 KIF4BQ2VIQ3 1234 aa12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 CFHR5Q9BXR6 569 aa12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 ABCC4O15439 1325 aa12.08□□□□□ -0.48
VPS9D1-205ENST00000565452 UBE2Q2LH0YL09 131 aa12.07□□□□□ -0.48
VPS9D1-205ENST00000565452 TTLL7Q6ZT98 887 aa12.07□□□□□ -0.48
VPS9D1-205ENST00000565452 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
VPS9D1-205ENST00000565452 GGA3Q9NZ52 723 aa12.07□□□□□ -0.48
VPS9D1-205ENST00000565452 TRIM17Q9Y577 477 aa12.07□□□□□ -0.48
VPS9D1-205ENST00000565452 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
VPS9D1-205ENST00000565452 AKAP11Q9UKA4 1901 aa12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 EN2P19622 333 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 SCARF1Q14162 830 aa12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 GIGYF2Q6Y7W6 1299 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
VPS9D1-205ENST00000565452 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 VIL1P09327 827 aaKnown RBP12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 MYL6BP14649 208 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 GRAPQ13588 217 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 TTLL12Q14166 644 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 ANGEL2Q5VTE6 544 aaKnown RBP12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 EYA3Q99504 573 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
VPS9D1-205ENST00000565452 G3V3G9 751 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 INHBEP58166 350 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 MCM10Q7L590 875 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 OTOP1Q7RTM1 612 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 KCNQ5Q9NR82 932 aa12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
VPS9D1-205ENST00000565452 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 ECE2O60344 883 aa12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 NF2P35240 595 aa12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 R3HDMLQ9H3Y0 253 aa12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 PTPN22Q9Y2R2 807 aa12.03□□□□□ -0.48
VPS9D1-205ENST00000565452 H0YGN5 161 aa12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 HCLS1P14317 486 aaPredicted RBP12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 PRKAR2BP31323 418 aa12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 ZNF280AP59817 542 aaPredicted RBP12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 PNISRQ8TF01 805 aaKnown RBP12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 MIS18AQ9NYP9 233 aa12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.49
VPS9D1-205ENST00000565452 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
VPS9D1-205ENST00000565452 AGBL3Q8NEM8 1001 aa12.01□□□□□ -0.49
VPS9D1-205ENST00000565452 ERO1AQ96HE7 468 aa12.01□□□□□ -0.49
VPS9D1-205ENST00000565452 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms