RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 GRIN3BO60391 1043 aa25.22■■□□□ 1.63
RPUSD1-205ENST00000565377 BBOX1O75936 387 aa25.22■■□□□ 1.63
RPUSD1-205ENST00000565377 NBPF7P0C2Y1 421 aaPredicted RBP25.22■■□□□ 1.63
RPUSD1-205ENST00000565377 ITPRIPQ8IWB1 547 aa25.22■■□□□ 1.63
RPUSD1-205ENST00000565377 DLEC1Q9Y238 1755 aa25.22■■□□□ 1.63
RPUSD1-205ENST00000565377 RTL9Q8NET4 1388 aa25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 DDX60Q8IY21 1712 aaKnown RBP25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 TNRC6CQ9HCJ0 1690 aaKnown RBP25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 GRIPAP1Q4V328 841 aa25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 PELP1Q8IZL8 1130 aaKnown RBP25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 TTLL11Q8NHH1 800 aa25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 CDC5LQ99459 802 aaKnown RBP25.21■■□□□ 1.63
RPUSD1-205ENST00000565377 CSF1RP07333 972 aa25.2■■□□□ 1.62
RPUSD1-205ENST00000565377 GRAPQ13588 217 aa25.2■■□□□ 1.62
RPUSD1-205ENST00000565377 PRPF40BQ6NWY9 871 aaKnown RBP25.2■■□□□ 1.62
RPUSD1-205ENST00000565377 C3orf67Q6ZVT6 689 aa25.2■■□□□ 1.62
RPUSD1-205ENST00000565377 GRAPLQ8TC17 118 aaPredicted RBP25.2■■□□□ 1.62
RPUSD1-205ENST00000565377 RRP1P56182 461 aaKnown RBP25.19■■□□□ 1.62
RPUSD1-205ENST00000565377 CC2D2BQ6DHV5 1058 aa25.19■■□□□ 1.62
RPUSD1-205ENST00000565377 DDX19BQ9UMR2 479 aa25.19■■□□□ 1.62
RPUSD1-205ENST00000565377 COL11A2P13942 1736 aaPredicted RBP25.18■■□□□ 1.62
RPUSD1-205ENST00000565377 PLIN1O60240 522 aa25.18■■□□□ 1.62
RPUSD1-205ENST00000565377 TNNQ9UQP3 1299 aa25.18■■□□□ 1.62
RPUSD1-205ENST00000565377 FOXO4P98177 505 aa25.17■■□□□ 1.62
RPUSD1-205ENST00000565377 MVPQ14764 893 aaKnown RBP25.17■■□□□ 1.62
RPUSD1-205ENST00000565377 PANK1Q8TE04 598 aa25.17■■□□□ 1.62
RPUSD1-205ENST00000565377 SUCLG2Q96I99 432 aa25.17■■□□□ 1.62
RPUSD1-205ENST00000565377 PPEF1O14829 653 aaPredicted RBP25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 GNAI2P04899 355 aa25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 RLBP1P12271 317 aa25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 IFIT5Q13325 482 aaKnown RBP25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 CCDC57Q2TAC2 916 aa25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 MEIS3Q99687 375 aa25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 CHMP3Q9Y3E7 222 aa25.16■■□□□ 1.62
RPUSD1-205ENST00000565377 BRCA1P38398 1863 aaKnown RBP25.15■■□□□ 1.62
RPUSD1-205ENST00000565377 ANKRD18BA2A2Z9 1011 aa25.15■■□□□ 1.62
RPUSD1-205ENST00000565377 RPS8P62241 208 aaKnown RBP25.15■■□□□ 1.62
RPUSD1-205ENST00000565377 RABL6Q3YEC7 729 aaPredicted RBP25.15■■□□□ 1.62
RPUSD1-205ENST00000565377 LMBR1LQ6UX01 489 aa25.15■■□□□ 1.62
RPUSD1-205ENST00000565377 ANKRD18AQ8IVF6 992 aa25.15■■□□□ 1.62
RPUSD1-205ENST00000565377 MYH3P11055 1940 aa25.14■■□□□ 1.62
RPUSD1-205ENST00000565377 IGHMBP2P38935 993 aaKnown RBP25.14■■□□□ 1.62
RPUSD1-205ENST00000565377 BICC1Q9H694 974 aaKnown RBP25.14■■□□□ 1.62
RPUSD1-205ENST00000565377 GREM2Q9H772 168 aa25.14■■□□□ 1.62
RPUSD1-205ENST00000565377 ITGA6P23229 1130 aa25.13■■□□□ 1.61
RPUSD1-205ENST00000565377 CCDC93Q567U6 631 aa25.13■■□□□ 1.61
RPUSD1-205ENST00000565377 RTKN2Q8IZC4 609 aa25.13■■□□□ 1.61
RPUSD1-205ENST00000565377 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
RPUSD1-205ENST00000565377 ZBTB7BO15156 539 aaPredicted RBP25.12■■□□□ 1.61
RPUSD1-205ENST00000565377 TAF7LQ5H9L4 462 aa25.12■■□□□ 1.61
RPUSD1-205ENST00000565377 SP8Q8IXZ3 490 aa25.12■■□□□ 1.61
RPUSD1-205ENST00000565377 CCDC85AQ96PX6 553 aaPredicted RBP25.12■■□□□ 1.61
RPUSD1-205ENST00000565377 WWC3Q9ULE0 1092 aa25.12■■□□□ 1.61
RPUSD1-205ENST00000565377 LRRFIP2Q9Y608 721 aaKnown RBP25.12■■□□□ 1.61
RPUSD1-205ENST00000565377 C21orf2O43822 256 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 YBX3P16989 372 aaKnown RBP eCLIP25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 FAM161AQ3B820 660 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 EPHA10Q5JZY3 1008 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 MPHOSPH8Q99549 860 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 SEC31BQ9NQW1 1179 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 COG6Q9Y2V7 657 aa25.11■■□□□ 1.61
RPUSD1-205ENST00000565377 ARFGEF1Q9Y6D6 1849 aa25.1■■□□□ 1.61
RPUSD1-205ENST00000565377 CENPBP07199 599 aaPredicted RBP25.1■■□□□ 1.61
RPUSD1-205ENST00000565377 C7orf43Q8WVR3 580 aa25.1■■□□□ 1.61
RPUSD1-205ENST00000565377 CELF1Q92879 486 aaKnown RBP25.1■■□□□ 1.61
RPUSD1-205ENST00000565377 BSDC1Q9NW68 430 aaPredicted RBP25.1■■□□□ 1.61
RPUSD1-205ENST00000565377 GOLGB1Q14789 3259 aaKnown RBP25.1■■□□□ 1.61
RPUSD1-205ENST00000565377 ARHGAP27Q6ZUM4 889 aa25.08■■□□□ 1.61
RPUSD1-205ENST00000565377 ANKRD44Q8N8A2 993 aa25.08■■□□□ 1.61
RPUSD1-205ENST00000565377 ZNF219Q9P2Y4 722 aaPredicted RBP25.07■■□□□ 1.6
RPUSD1-205ENST00000565377 MTX1Q13505 466 aa25.06■■□□□ 1.6
RPUSD1-205ENST00000565377 SUPT20HQ8NEM7 779 aa25.06■■□□□ 1.6
RPUSD1-205ENST00000565377 SUPT16HQ9Y5B9 1047 aaKnown RBP25.06■■□□□ 1.6
RPUSD1-205ENST00000565377 SLX4Q8IY92 1834 aa25.06■■□□□ 1.6
RPUSD1-205ENST00000565377 AAMPQ13685 434 aa25.05■■□□□ 1.6
RPUSD1-205ENST00000565377 C20orf194Q5TEA3 1177 aa25.05■■□□□ 1.6
RPUSD1-205ENST00000565377 FBXO3Q9UK99 471 aa25.05■■□□□ 1.6
RPUSD1-205ENST00000565377 LTBP3Q9NS15 1303 aa25.05■■□□□ 1.6
RPUSD1-205ENST00000565377 LDHAL6AQ6ZMR3 332 aa25.04■■□□□ 1.6
RPUSD1-205ENST00000565377 MPNDQ8N594 471 aa25.04■■□□□ 1.6
RPUSD1-205ENST00000565377 PSMD1Q99460 953 aa25.04■■□□□ 1.6
RPUSD1-205ENST00000565377 TAOK3Q9H2K8 898 aa25.04■■□□□ 1.6
RPUSD1-205ENST00000565377 DPP8Q6V1X1 898 aaPredicted RBP25.03■■□□□ 1.6
RPUSD1-205ENST00000565377 ANKRD2Q9GZV1 360 aa25.03■■□□□ 1.6
RPUSD1-205ENST00000565377 VPS33BQ9H267 617 aa25.03■■□□□ 1.6
RPUSD1-205ENST00000565377 CNNM1Q9NRU3 951 aa25.03■■□□□ 1.6
RPUSD1-205ENST00000565377 ZBTB40Q9NUA8 1239 aa25.03■■□□□ 1.6
RPUSD1-205ENST00000565377 SRGAP3O43295 1099 aa25.02■■□□□ 1.6
RPUSD1-205ENST00000565377 FKBP4Q02790 459 aaKnown RBP eCLIP25.02■■□□□ 1.6
RPUSD1-205ENST00000565377 ANKIB1Q9P2G1 1089 aa25.02■■□□□ 1.6
RPUSD1-205ENST00000565377 CACNA1SQ13698 1873 aa25.02■■□□□ 1.6
RPUSD1-205ENST00000565377 RPAP2Q8IXW5 612 aaPredicted RBP25.01■■□□□ 1.59
RPUSD1-205ENST00000565377 PODXL2Q9NZ53 605 aa25■■□□□ 1.59
RPUSD1-205ENST00000565377 MINPP1Q9UNW1 487 aa25■■□□□ 1.59
RPUSD1-205ENST00000565377 NSFL1CQ9UNZ2 370 aaKnown RBP25■■□□□ 1.59
RPUSD1-205ENST00000565377 XDHP47989 1333 aa25■■□□□ 1.59
RPUSD1-205ENST00000565377 HMMRO75330 724 aa24.99■■□□□ 1.59
RPUSD1-205ENST00000565377 ATP8B2P98198 1209 aa24.99■■□□□ 1.59
RPUSD1-205ENST00000565377 MROH5Q6ZUA9 1318 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms