RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CCT4P50991 539 aaKnown RBP16.55■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
TRAPPC2L-210ENST00000565309 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
TRAPPC2L-210ENST00000565309 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
TRAPPC2L-210ENST00000565309 PLA2G12BQ9BX93 195 aa16.55■□□□□ 0.24
TRAPPC2L-210ENST00000565309 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC2L-210ENST00000565309 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC2L-210ENST00000565309 GRAPQ13588 217 aa16.54■□□□□ 0.24
TRAPPC2L-210ENST00000565309 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
TRAPPC2L-210ENST00000565309 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
TRAPPC2L-210ENST00000565309 UTYO14607 1347 aa16.53■□□□□ 0.24
TRAPPC2L-210ENST00000565309 TAF1P21675 1872 aa16.53■□□□□ 0.24
TRAPPC2L-210ENST00000565309 BBOX1O75936 387 aa16.53■□□□□ 0.24
TRAPPC2L-210ENST00000565309 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
TRAPPC2L-210ENST00000565309 USP44Q9H0E7 712 aa16.53■□□□□ 0.24
TRAPPC2L-210ENST00000565309 SEC31BQ9NQW1 1179 aa16.53■□□□□ 0.24
TRAPPC2L-210ENST00000565309 FOXO4P98177 505 aa16.52■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
TRAPPC2L-210ENST00000565309 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
TRAPPC2L-210ENST00000565309 SLC51AQ86UW1 340 aa16.52■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CELF1Q92879 486 aaKnown RBP16.52■□□□□ 0.24
TRAPPC2L-210ENST00000565309 GREM2Q9H772 168 aa16.52■□□□□ 0.24
TRAPPC2L-210ENST00000565309 MYH3P11055 1940 aa16.52■□□□□ 0.23
TRAPPC2L-210ENST00000565309 NFKBIEO00221 500 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 CSF1RP07333 972 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 RASSF7Q02833 373 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 CHD4Q14839 1912 aa16.51■□□□□ 0.23
TRAPPC2L-210ENST00000565309 COL4A1P02462 1669 aa16.5■□□□□ 0.23
TRAPPC2L-210ENST00000565309 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
TRAPPC2L-210ENST00000565309 LMBR1LQ6UX01 489 aa16.5■□□□□ 0.23
TRAPPC2L-210ENST00000565309 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
TRAPPC2L-210ENST00000565309 RTKN2Q8IZC4 609 aa16.5■□□□□ 0.23
TRAPPC2L-210ENST00000565309 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC2L-210ENST00000565309 FER1L6Q2WGJ9 1857 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 ANKRD18AQ8IVF6 992 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 KAZALD1Q96I82 304 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 CHMP3Q9Y3E7 222 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 RTL9Q8NET4 1388 aa16.49■□□□□ 0.23
TRAPPC2L-210ENST00000565309 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC2L-210ENST00000565309 RLBP1P12271 317 aa16.48■□□□□ 0.23
TRAPPC2L-210ENST00000565309 ITGA6P23229 1130 aa16.48■□□□□ 0.23
TRAPPC2L-210ENST00000565309 PRELPP51888 382 aa16.48■□□□□ 0.23
TRAPPC2L-210ENST00000565309 TMEM57Q8N5G2 664 aa16.48■□□□□ 0.23
TRAPPC2L-210ENST00000565309 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
TRAPPC2L-210ENST00000565309 LTBP3Q9NS15 1303 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 PLIN1O60240 522 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 LMNB1P20700 586 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 YY1P25490 414 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 C9orf131Q5VYM1 1079 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 MEIS3Q99687 375 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
TRAPPC2L-210ENST00000565309 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
TRAPPC2L-210ENST00000565309 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
TRAPPC2L-210ENST00000565309 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
TRAPPC2L-210ENST00000565309 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
TRAPPC2L-210ENST00000565309 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC2L-210ENST00000565309 SBF1O95248 1867 aa16.46■□□□□ 0.22
TRAPPC2L-210ENST00000565309 GNAI3P08754 354 aa16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 ITPRIPQ8IWB1 547 aa16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 MPNDQ8N594 471 aa16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 PSMD1Q99460 953 aa16.45■□□□□ 0.22
TRAPPC2L-210ENST00000565309 MS4A1P11836 297 aa16.44■□□□□ 0.22
TRAPPC2L-210ENST00000565309 BSDC1Q9NW68 430 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC2L-210ENST00000565309 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
TRAPPC2L-210ENST00000565309 HDAC5Q9UQL6 1122 aa16.44■□□□□ 0.22
TRAPPC2L-210ENST00000565309 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
TRAPPC2L-210ENST00000565309 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
TRAPPC2L-210ENST00000565309 LRRC37AA6NMS7 1700 aa16.43■□□□□ 0.22
TRAPPC2L-210ENST00000565309 GPSM2P81274 684 aa16.43■□□□□ 0.22
TRAPPC2L-210ENST00000565309 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
TRAPPC2L-210ENST00000565309 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC2L-210ENST00000565309 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
TRAPPC2L-210ENST00000565309 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
TRAPPC2L-210ENST00000565309 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC2L-210ENST00000565309 RTFDC1Q9BY42 306 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC2L-210ENST00000565309 ANKIB1Q9P2G1 1089 aa16.42■□□□□ 0.22
TRAPPC2L-210ENST00000565309 MINPP1Q9UNW1 487 aa16.42■□□□□ 0.22
TRAPPC2L-210ENST00000565309 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
TRAPPC2L-210ENST00000565309 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
TRAPPC2L-210ENST00000565309 C6orf229H3BNL8 230 aa16.4■□□□□ 0.22
TRAPPC2L-210ENST00000565309 ZBTB7BO15156 539 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms