RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
HERC2-207ENST00000564734 JARID2Q92833 1246 aaPredicted RBP18.22■□□□□ 0.51
HERC2-207ENST00000564734 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
HERC2-207ENST00000564734 LETM1O95202 739 aaPredicted RBP18.22■□□□□ 0.51
HERC2-207ENST00000564734 RPS6KB1P23443 525 aa18.22■□□□□ 0.51
HERC2-207ENST00000564734 TFCP2Q12800 502 aa18.22■□□□□ 0.51
HERC2-207ENST00000564734 ZKSCAN5Q9Y2L8 839 aa18.22■□□□□ 0.51
HERC2-207ENST00000564734 DTNBO60941 627 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 KCNJ4P48050 445 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 UVSSAQ2YD98 709 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 RNF20Q5VTR2 975 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 EDC3Q96F86 508 aaKnown RBP18.21■□□□□ 0.51
HERC2-207ENST00000564734 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
HERC2-207ENST00000564734 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
HERC2-207ENST00000564734 MCM5P33992 734 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
HERC2-207ENST00000564734 TOB2Q14106 344 aaPredicted RBP18.21■□□□□ 0.51
HERC2-207ENST00000564734 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
HERC2-207ENST00000564734 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 RFX7Q2KHR2 1363 aa18.21■□□□□ 0.51
HERC2-207ENST00000564734 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.5
HERC2-207ENST00000564734 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.5
HERC2-207ENST00000564734 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.5
HERC2-207ENST00000564734 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 CPDO75976 1380 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 FIBPO43427 364 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 ANKRD1Q15327 319 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 FUCA2Q9BTY2 467 aa18.2■□□□□ 0.5
HERC2-207ENST00000564734 AFDNP55196 1824 aaKnown RBP18.19■□□□□ 0.5
HERC2-207ENST00000564734 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
HERC2-207ENST00000564734 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
HERC2-207ENST00000564734 PDIA4P13667 645 aaKnown RBP18.19■□□□□ 0.5
HERC2-207ENST00000564734 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
HERC2-207ENST00000564734 CABP4P57796 275 aa18.18■□□□□ 0.5
HERC2-207ENST00000564734 A0A087WZG4 1122 aa18.18■□□□□ 0.5
HERC2-207ENST00000564734 ATP5J2-PTCD1G3V325 749 aa18.18■□□□□ 0.5
HERC2-207ENST00000564734 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
HERC2-207ENST00000564734 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
HERC2-207ENST00000564734 HAUS7Q99871 368 aa18.18■□□□□ 0.5
HERC2-207ENST00000564734 H7C1W4 665 aa18.17■□□□□ 0.5
HERC2-207ENST00000564734 ZNF609O15014 1411 aa18.17■□□□□ 0.5
HERC2-207ENST00000564734 FOXO4P98177 505 aa18.17■□□□□ 0.5
HERC2-207ENST00000564734 LARP1BQ659C4 914 aaKnown RBP18.17■□□□□ 0.5
HERC2-207ENST00000564734 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
HERC2-207ENST00000564734 NBPF26B4DH59 902 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 NBPF14Q5TI25 921 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 NBPF10Q6P3W6 841 aaKnown RBP18.16■□□□□ 0.5
HERC2-207ENST00000564734 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.16■□□□□ 0.5
HERC2-207ENST00000564734 NBPF15Q8N660 670 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 TCEANC2Q96MN5 208 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 VPS37CA5D8V6 355 aaPredicted RBP18.16■□□□□ 0.5
HERC2-207ENST00000564734 ADAMTS2O95450 1211 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 TPM2P07951 284 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
HERC2-207ENST00000564734 TERF1P54274 439 aa18.15■□□□□ 0.5
HERC2-207ENST00000564734 KRT32Q14532 448 aa18.15■□□□□ 0.5
HERC2-207ENST00000564734 NDUFB9Q9Y6M9 179 aa18.15■□□□□ 0.5
HERC2-207ENST00000564734 CHGBP05060 677 aa18.14■□□□□ 0.5
HERC2-207ENST00000564734 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.5
HERC2-207ENST00000564734 PDCP20941 246 aa18.14■□□□□ 0.49
HERC2-207ENST00000564734 ATG9AQ7Z3C6 839 aa18.14■□□□□ 0.49
HERC2-207ENST00000564734 ELP1O95163 1332 aa18.14■□□□□ 0.49
HERC2-207ENST00000564734 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
HERC2-207ENST00000564734 HCLS1P14317 486 aaPredicted RBP18.13■□□□□ 0.49
HERC2-207ENST00000564734 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
HERC2-207ENST00000564734 MCMDC2Q4G0Z9 681 aa18.13■□□□□ 0.49
HERC2-207ENST00000564734 NEK1Q96PY6 1258 aa18.13■□□□□ 0.49
HERC2-207ENST00000564734 SEC62Q99442 399 aaKnown RBP18.13■□□□□ 0.49
HERC2-207ENST00000564734 NUP188Q5SRE5 1749 aa18.13■□□□□ 0.49
HERC2-207ENST00000564734 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 CCDC129Q6ZRS4 1044 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 ROBO1Q9Y6N7 1651 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 DNAJC2Q99543 621 aaKnown RBP18.12■□□□□ 0.49
HERC2-207ENST00000564734 GPR108Q9NPR9 543 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 TJP1Q07157 1748 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 KBTBD3Q8NAB2 608 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
HERC2-207ENST00000564734 SH3TC1Q8TE82 1336 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 KCPQ6ZWJ8 1503 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 CYP21A2P08686 494 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 KRT85P78386 507 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 TPRNQ4KMQ1 711 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 USP25Q9UHP3 1055 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 GTF3C6Q969F1 213 aa18.11■□□□□ 0.49
HERC2-207ENST00000564734 SOS2Q07890 1332 aaPredicted RBP18.1■□□□□ 0.49
HERC2-207ENST00000564734 TICAM2Q86XR7 235 aa18.1■□□□□ 0.49
HERC2-207ENST00000564734 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.1■□□□□ 0.49
HERC2-207ENST00000564734 PAPPAQ13219 1627 aa18.1■□□□□ 0.49
HERC2-207ENST00000564734 KDM4AO75164 1064 aa18.1■□□□□ 0.49
HERC2-207ENST00000564734 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
HERC2-207ENST00000564734 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
HERC2-207ENST00000564734 FERMT3Q86UX7 667 aa18.1■□□□□ 0.49
HERC2-207ENST00000564734 ERVV-2B6SEH9 535 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms