RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PPEF1O14829 653 aaPredicted RBP20.12■□□□□ 0.81
RAB40C-208ENST00000564703 MS4A1P11836 297 aa20.12■□□□□ 0.81
RAB40C-208ENST00000564703 TRIM27P14373 513 aa20.12■□□□□ 0.81
RAB40C-208ENST00000564703 GRIPAP1Q4V328 841 aa20.12■□□□□ 0.81
RAB40C-208ENST00000564703 TMC4Q7Z404 712 aa20.12■□□□□ 0.81
RAB40C-208ENST00000564703 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
RAB40C-208ENST00000564703 RTKN2Q8IZC4 609 aa20.12■□□□□ 0.81
RAB40C-208ENST00000564703 TTLL11Q8NHH1 800 aa20.12■□□□□ 0.81
RAB40C-208ENST00000564703 TNRC6CQ9HCJ0 1690 aaKnown RBP20.11■□□□□ 0.81
RAB40C-208ENST00000564703 CASP7P55210 303 aa20.11■□□□□ 0.81
RAB40C-208ENST00000564703 RPS8P62241 208 aaKnown RBP20.11■□□□□ 0.81
RAB40C-208ENST00000564703 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
RAB40C-208ENST00000564703 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
RAB40C-208ENST00000564703 USP44Q9H0E7 712 aa20.11■□□□□ 0.81
RAB40C-208ENST00000564703 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
RAB40C-208ENST00000564703 COL11A2P13942 1736 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-208ENST00000564703 NBPF7P0C2Y1 421 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-208ENST00000564703 DZIP1LQ8IYY4 767 aaKnown RBP20.1■□□□□ 0.81
RAB40C-208ENST00000564703 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-208ENST00000564703 C7orf43Q8WVR3 580 aa20.1■□□□□ 0.81
RAB40C-208ENST00000564703 CDC5LQ99459 802 aaKnown RBP20.1■□□□□ 0.81
RAB40C-208ENST00000564703 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
RAB40C-208ENST00000564703 ARFGEF1Q9Y6D6 1849 aa20.1■□□□□ 0.81
RAB40C-208ENST00000564703 ANKRD18AQ8IVF6 992 aa20.09■□□□□ 0.81
RAB40C-208ENST00000564703 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
RAB40C-208ENST00000564703 ATP6V0A2Q9Y487 856 aa20.09■□□□□ 0.81
RAB40C-208ENST00000564703 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
RAB40C-208ENST00000564703 UTYO14607 1347 aa20.08■□□□□ 0.81
RAB40C-208ENST00000564703 CACNA1SQ13698 1873 aa20.08■□□□□ 0.81
RAB40C-208ENST00000564703 CSF1RP07333 972 aa20.08■□□□□ 0.81
RAB40C-208ENST00000564703 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.81
RAB40C-208ENST00000564703 LMBR1LQ6UX01 489 aa20.08■□□□□ 0.81
RAB40C-208ENST00000564703 SEC31BQ9NQW1 1179 aa20.08■□□□□ 0.81
RAB40C-208ENST00000564703 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 GNAI3P08754 354 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 FOXO4P98177 505 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 IFIT5Q13325 482 aaKnown RBP20.07■□□□□ 0.8
RAB40C-208ENST00000564703 CCDC57Q2TAC2 916 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
RAB40C-208ENST00000564703 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 GREM2Q9H772 168 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 LAMB2P55268 1798 aa20.07■□□□□ 0.8
RAB40C-208ENST00000564703 ITGA6P23229 1130 aa20.06■□□□□ 0.8
RAB40C-208ENST00000564703 IGHMBP2P38935 993 aaKnown RBP20.06■□□□□ 0.8
RAB40C-208ENST00000564703 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
RAB40C-208ENST00000564703 TAF7LQ5H9L4 462 aa20.05■□□□□ 0.8
RAB40C-208ENST00000564703 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
RAB40C-208ENST00000564703 MPNDQ8N594 471 aa20.05■□□□□ 0.8
RAB40C-208ENST00000564703 TMEM57Q8N5G2 664 aa20.05■□□□□ 0.8
RAB40C-208ENST00000564703 MPHOSPH8Q99549 860 aa20.05■□□□□ 0.8
RAB40C-208ENST00000564703 TNNQ9UQP3 1299 aa20.05■□□□□ 0.8
RAB40C-208ENST00000564703 MYH3P11055 1940 aa20.04■□□□□ 0.8
RAB40C-208ENST00000564703 CHD4Q14839 1912 aa20.04■□□□□ 0.8
RAB40C-208ENST00000564703 LMNB1P20700 586 aa20.04■□□□□ 0.8
RAB40C-208ENST00000564703 YY1P25490 414 aa20.04■□□□□ 0.8
RAB40C-208ENST00000564703 FKBP4Q02790 459 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAB40C-208ENST00000564703 RASSF7Q02833 373 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 FAM161AQ3B820 660 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 C9orf131Q5VYM1 1079 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 DPP8Q6V1X1 898 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-208ENST00000564703 ITPRIPQ8IWB1 547 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 SUPT20HQ8NEM7 779 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 BICC1Q9H694 974 aaKnown RBP20.03■□□□□ 0.8
RAB40C-208ENST00000564703 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 NSFL1CQ9UNZ2 370 aaKnown RBP20.03■□□□□ 0.8
RAB40C-208ENST00000564703 RTL9Q8NET4 1388 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 TAF1P21675 1872 aa20.03■□□□□ 0.8
RAB40C-208ENST00000564703 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.8
RAB40C-208ENST00000564703 NFKBIEO00221 500 aa20.02■□□□□ 0.8
RAB40C-208ENST00000564703 PLIN1O60240 522 aa20.02■□□□□ 0.8
RAB40C-208ENST00000564703 PSMD1Q99460 953 aa20.02■□□□□ 0.8
RAB40C-208ENST00000564703 BSDC1Q9NW68 430 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-208ENST00000564703 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.8
RAB40C-208ENST00000564703 KAZALD1Q96I82 304 aa20.01■□□□□ 0.79
RAB40C-208ENST00000564703 MEIS3Q99687 375 aa20.01■□□□□ 0.79
RAB40C-208ENST00000564703 PANK1Q8TE04 598 aa20■□□□□ 0.79
RAB40C-208ENST00000564703 C6orf229H3BNL8 230 aa19.99■□□□□ 0.79
RAB40C-208ENST00000564703 GNAI2P04899 355 aa19.99■□□□□ 0.79
RAB40C-208ENST00000564703 RLBP1P12271 317 aa19.99■□□□□ 0.79
RAB40C-208ENST00000564703 RABL6Q3YEC7 729 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-208ENST00000564703 LDHAL6AQ6ZMR3 332 aa19.99■□□□□ 0.79
RAB40C-208ENST00000564703 CHMP4BQ9H444 224 aaKnown RBP19.99■□□□□ 0.79
RAB40C-208ENST00000564703 ZNF277Q9NRM2 450 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-208ENST00000564703 LRRFIP2Q9Y608 721 aaKnown RBP19.99■□□□□ 0.79
RAB40C-208ENST00000564703 PDE3AQ14432 1141 aa19.98■□□□□ 0.79
RAB40C-208ENST00000564703 JDP2Q8WYK2 163 aa19.98■□□□□ 0.79
RAB40C-208ENST00000564703 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
RAB40C-208ENST00000564703 FER1L6Q2WGJ9 1857 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
RAB40C-208ENST00000564703 GPSM2P81274 684 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 ANKRD44Q8N8A2 993 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 EYA3Q99504 573 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 ANKRD2Q9GZV1 360 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 CNNM1Q9NRU3 951 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 MINPP1Q9UNW1 487 aa19.97■□□□□ 0.79
RAB40C-208ENST00000564703 LARGE2Q8N3Y3 721 aa19.96■□□□□ 0.79
RAB40C-208ENST00000564703 RTFDC1Q9BY42 306 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-208ENST00000564703 GGA1Q9UJY5 639 aa19.96■□□□□ 0.79
RAB40C-208ENST00000564703 CCDC88AQ3V6T2 1871 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms