RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 FGD1P98174 961 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 MAP3K11Q16584 847 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-249ENST00000564606 IFNL2Q8IZJ0 200 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 GPR108Q9NPR9 543 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 PALD1Q9ULE6 856 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 SLIT3O75094 1523 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 ADCY9O60503 1353 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 RPAP1Q9BWH6 1393 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 KDM4AO75164 1064 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 SNRPA1P09661 255 aaKnown RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 ATP5JP18859 108 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 ATN1P54259 1190 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 PKP1Q13835 747 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 CREB3L3Q68CJ9 461 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 PRPF40BQ6NWY9 871 aaKnown RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 DCAF5Q96JK2 942 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 ZNF396Q96N95 335 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 NUP62CLQ9H1M0 184 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 CTNNA3Q9UI47 895 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 RBM8AQ9Y5S9 174 aaKnown RBP9.03□□□□□ -0.96
ATXN3-249ENST00000564606 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
ATXN3-249ENST00000564606 VPS37CA5D8V6 355 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-249ENST00000564606 H3BQV1 296 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 RPS6KB1P23443 525 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 TPM4P67936 248 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 ZRSR1Q15695 479 aaKnown RBP9.02□□□□□ -0.97
ATXN3-249ENST00000564606 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
ATXN3-249ENST00000564606 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 SLC52A2Q9HAB3 445 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 HELLSQ9NRZ9 838 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 ATG3Q9NT62 314 aa9.02□□□□□ -0.97
ATXN3-249ENST00000564606 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.97
ATXN3-249ENST00000564606 CHD2O14647 1828 aaKnown RBP9.02□□□□□ -0.97
ATXN3-249ENST00000564606 LTN1O94822 1766 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 ZNF142P52746 1687 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 TUBGCP6Q96RT7 1819 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 ZBTB7CA1YPR0 619 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 NPHP4O75161 1426 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 TUBB4AP04350 444 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 ZFYP08048 801 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 DCCP43146 1447 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 MCMDC2Q4G0Z9 681 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 TSHZ3Q63HK5 1081 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 ZNF790Q6PG37 636 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 MPRIPQ6WCQ1 1025 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 KRT28Q7Z3Y7 464 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 UNC5CLQ8IV45 518 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 CCDC83Q8IWF9 413 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 FOXD4L4Q8WXT5 416 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 SPATA32Q96LK8 384 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 C19orf44Q9H6X5 657 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
ATXN3-249ENST00000564606 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
ATXN3-249ENST00000564606 CRYBG1Q9Y4K1 1723 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 SLC27A2O14975 620 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 FIBPO43427 364 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 ADCY5O95622 1261 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 GCKRQ14397 625 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 NAA16Q6N069 864 aaPredicted RBP9□□□□□ -0.97
ATXN3-249ENST00000564606 USHBP1Q8N6Y0 703 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 TNMDQ9H2S6 317 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 MTMR6Q9Y217 621 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 AKAP2Q9Y2D5 859 aa9□□□□□ -0.97
ATXN3-249ENST00000564606 UQCRHLA0A096LP55 91 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 KIF2AO00139 706 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 ATMINO43313 823 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 UQCRHP07919 91 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 ATF3P18847 181 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 MKRN3Q13064 507 aaKnown RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 NMIQ13287 307 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 ZSCAN25Q6NSZ9 544 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 CCDC73Q6ZRK6 1079 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 PDCD7Q8N8D1 485 aaKnown RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 RNF214Q8ND24 703 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 DSCC1Q9BVC3 393 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 TEX13AQ9BXU3 409 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 BICC1Q9H694 974 aaKnown RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 CNPY2Q9Y2B0 182 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms