RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 NARFQ9UHQ1 456 aa18.99■□□□□ 0.63
COMMD4-210ENST00000564587 NIP7Q9Y221 180 aaKnown RBP eCLIP18.99■□□□□ 0.63
COMMD4-210ENST00000564587 BRWD3Q6RI45 1802 aa18.99■□□□□ 0.63
COMMD4-210ENST00000564587 ANKRD18BA2A2Z9 1011 aa18.98■□□□□ 0.63
COMMD4-210ENST00000564587 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
COMMD4-210ENST00000564587 ADRA2BP18089 450 aa18.98■□□□□ 0.63
COMMD4-210ENST00000564587 TNNI3KQ59H18 835 aa18.98■□□□□ 0.63
COMMD4-210ENST00000564587 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
COMMD4-210ENST00000564587 RILPL2Q969X0 211 aa18.98■□□□□ 0.63
COMMD4-210ENST00000564587 FPGT-TNNI3KV9GXZ4 949 aa18.98■□□□□ 0.63
COMMD4-210ENST00000564587 ZPR1O75312 459 aa18.97■□□□□ 0.63
COMMD4-210ENST00000564587 TFCP2Q12800 502 aa18.97■□□□□ 0.63
COMMD4-210ENST00000564587 BECN1Q14457 450 aa18.97■□□□□ 0.63
COMMD4-210ENST00000564587 SUSD4Q5VX71 490 aa18.97■□□□□ 0.63
COMMD4-210ENST00000564587 AKAP2Q9Y2D5 859 aa18.97■□□□□ 0.63
COMMD4-210ENST00000564587 AK9Q5TCS8 1911 aa18.96■□□□□ 0.63
COMMD4-210ENST00000564587 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
COMMD4-210ENST00000564587 GNPATO15228 680 aa18.96■□□□□ 0.63
COMMD4-210ENST00000564587 ATG9AQ7Z3C6 839 aa18.96■□□□□ 0.63
COMMD4-210ENST00000564587 EVI5LQ96CN4 794 aa18.96■□□□□ 0.63
COMMD4-210ENST00000564587 CEP126Q9P2H0 1117 aa18.96■□□□□ 0.63
COMMD4-210ENST00000564587 C4BP0C0L5 1744 aa18.95■□□□□ 0.62
COMMD4-210ENST00000564587 HIP1O00291 1037 aa18.95■□□□□ 0.62
COMMD4-210ENST00000564587 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
COMMD4-210ENST00000564587 TICAM2Q86XR7 235 aa18.95■□□□□ 0.62
COMMD4-210ENST00000564587 NYXQ9GZU5 481 aa18.95■□□□□ 0.62
COMMD4-210ENST00000564587 RTL9Q8NET4 1388 aa18.94■□□□□ 0.62
COMMD4-210ENST00000564587 NTSR2O95665 410 aa18.94■□□□□ 0.62
COMMD4-210ENST00000564587 ATP5JP18859 108 aa18.94■□□□□ 0.62
COMMD4-210ENST00000564587 CHMLP26374 656 aa18.94■□□□□ 0.62
COMMD4-210ENST00000564587 TRAPPC3LQ5T215 181 aa18.94■□□□□ 0.62
COMMD4-210ENST00000564587 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-210ENST00000564587 LAMB2P55268 1798 aa18.93■□□□□ 0.62
COMMD4-210ENST00000564587 ITGA6P23229 1130 aa18.93■□□□□ 0.62
COMMD4-210ENST00000564587 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
COMMD4-210ENST00000564587 RUFY2Q8WXA3 655 aa18.93■□□□□ 0.62
COMMD4-210ENST00000564587 KCNQ4P56696 695 aa18.92■□□□□ 0.62
COMMD4-210ENST00000564587 ESYT1Q9BSJ8 1104 aa18.92■□□□□ 0.62
COMMD4-210ENST00000564587 TRIM37O94972 964 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 RFC4P35249 363 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 LDHAL6AQ6ZMR3 332 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 SYNE4Q8N205 404 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 IL27Q8NEV9 243 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 ZNF594Q96JF6 807 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-210ENST00000564587 SETDB2Q96T68 719 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 USP26Q9BXU7 913 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 GREM2Q9H772 168 aa18.91■□□□□ 0.62
COMMD4-210ENST00000564587 DBNLQ9UJU6 430 aaKnown RBP18.91■□□□□ 0.62
COMMD4-210ENST00000564587 LRRC24Q50LG9 513 aa18.9■□□□□ 0.62
COMMD4-210ENST00000564587 SLC10A5Q5PT55 438 aa18.9■□□□□ 0.62
COMMD4-210ENST00000564587 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
COMMD4-210ENST00000564587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
COMMD4-210ENST00000564587 ARHGEF1Q92888 912 aaKnown RBP18.9■□□□□ 0.62
COMMD4-210ENST00000564587 ZNF609O15014 1411 aa18.9■□□□□ 0.62
COMMD4-210ENST00000564587 PLSCR1O15162 318 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 MCCP23508 829 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 SSFA2P28290 1259 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 RIPOR2Q9Y4F9 1068 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-210ENST00000564587 RFX7Q2KHR2 1363 aa18.89■□□□□ 0.61
COMMD4-210ENST00000564587 GTF2E1P29083 439 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-210ENST00000564587 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
COMMD4-210ENST00000564587 TPTE2Q6XPS3 522 aa18.88■□□□□ 0.61
COMMD4-210ENST00000564587 CCDC125Q86Z20 511 aa18.88■□□□□ 0.61
COMMD4-210ENST00000564587 NEUROD6Q96NK8 337 aa18.88■□□□□ 0.61
COMMD4-210ENST00000564587 PUS3Q9BZE2 481 aaKnown RBP18.88■□□□□ 0.61
COMMD4-210ENST00000564587 DIAPH3Q9NSV4 1193 aa18.88■□□□□ 0.61
COMMD4-210ENST00000564587 TLR7Q9NYK1 1049 aaKnown RBP18.88■□□□□ 0.61
COMMD4-210ENST00000564587 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
COMMD4-210ENST00000564587 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
COMMD4-210ENST00000564587 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 MSH5O43196 834 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 HCLS1P14317 486 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-210ENST00000564587 COL24A1Q17RW2 1714 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 METTL24Q5JXM2 366 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 CCDC158Q5M9N0 1113 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 TBC1D9BQ66K14 1250 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 ABCC12Q96J65 1359 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-210ENST00000564587 CDC5LQ99459 802 aaKnown RBP18.87■□□□□ 0.61
COMMD4-210ENST00000564587 HAUS7Q99871 368 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 DBNDD2Q9BQY9 259 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 BOLA2Q9H3K6 86 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 LRRC4BQ9NT99 713 aa18.87■□□□□ 0.61
COMMD4-210ENST00000564587 RAD50Q92878 1312 aa18.86■□□□□ 0.61
COMMD4-210ENST00000564587 FAM177BA6PVY3 158 aa18.86■□□□□ 0.61
COMMD4-210ENST00000564587 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
COMMD4-210ENST00000564587 MPHOSPH8Q99549 860 aa18.86■□□□□ 0.61
COMMD4-210ENST00000564587 LRP5O75197 1615 aa18.85■□□□□ 0.61
COMMD4-210ENST00000564587 SGSM2O43147 1006 aa18.85■□□□□ 0.61
COMMD4-210ENST00000564587 MAP4K4O95819 1239 aaPredicted RBP18.85■□□□□ 0.61
COMMD4-210ENST00000564587 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
COMMD4-210ENST00000564587 KIAA1211Q6ZU35 1233 aa18.85■□□□□ 0.61
COMMD4-210ENST00000564587 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
COMMD4-210ENST00000564587 SNX21Q969T3 373 aa18.85■□□□□ 0.61
COMMD4-210ENST00000564587 SRP68Q9UHB9 627 aaKnown RBP18.85■□□□□ 0.61
COMMD4-210ENST00000564587 EP400Q96L91 3159 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms