RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TRMT112Q9UI30 125 aaKnown RBP18.45■□□□□ 0.54
CDR2-204ENST00000564542 DDX60Q8IY21 1712 aaKnown RBP18.45■□□□□ 0.54
CDR2-204ENST00000564542 GRAPQ13588 217 aa18.44■□□□□ 0.54
CDR2-204ENST00000564542 CST9Q5W186 159 aa18.44■□□□□ 0.54
CDR2-204ENST00000564542 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
CDR2-204ENST00000564542 GRAPLQ8TC17 118 aaPredicted RBP18.44■□□□□ 0.54
CDR2-204ENST00000564542 CAPNS2Q96L46 248 aa18.44■□□□□ 0.54
CDR2-204ENST00000564542 TLL2Q9Y6L7 1015 aa18.44■□□□□ 0.54
CDR2-204ENST00000564542 CHL1O00533 1208 aa18.43■□□□□ 0.54
CDR2-204ENST00000564542 GMPSP49915 693 aaPredicted RBP18.43■□□□□ 0.54
CDR2-204ENST00000564542 CIAPIN1Q6FI81 312 aa18.43■□□□□ 0.54
CDR2-204ENST00000564542 PAXIP1Q6ZW49 1069 aaPredicted RBP18.43■□□□□ 0.54
CDR2-204ENST00000564542 TMC4Q7Z404 712 aa18.43■□□□□ 0.54
CDR2-204ENST00000564542 TAF1P21675 1872 aa18.43■□□□□ 0.54
CDR2-204ENST00000564542 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
CDR2-204ENST00000564542 CYP4F22Q6NT55 531 aa18.42■□□□□ 0.54
CDR2-204ENST00000564542 CHPF2Q9P2E5 772 aa18.42■□□□□ 0.54
CDR2-204ENST00000564542 TNIP1Q15025 636 aa18.41■□□□□ 0.54
CDR2-204ENST00000564542 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
CDR2-204ENST00000564542 PGAP2Q9UHJ9 254 aa18.41■□□□□ 0.54
CDR2-204ENST00000564542 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
CDR2-204ENST00000564542 RAD17O75943 681 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 HOXB7P09629 217 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 GPR101Q96P66 508 aaPredicted RBP18.4■□□□□ 0.54
CDR2-204ENST00000564542 BEGAINQ9BUH8 593 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
CDR2-204ENST00000564542 CELF2O95319 508 aaKnown RBP18.39■□□□□ 0.53
CDR2-204ENST00000564542 GRM1Q13255 1194 aa18.39■□□□□ 0.53
CDR2-204ENST00000564542 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.53
CDR2-204ENST00000564542 ZC3H15Q8WU90 426 aaKnown RBP18.39■□□□□ 0.53
CDR2-204ENST00000564542 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
CDR2-204ENST00000564542 YDJCA8MPS7 323 aa18.38■□□□□ 0.53
CDR2-204ENST00000564542 MAP2K2P36507 400 aa18.38■□□□□ 0.53
CDR2-204ENST00000564542 SAPCD2Q86UD0 394 aa18.38■□□□□ 0.53
CDR2-204ENST00000564542 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
CDR2-204ENST00000564542 ISCA1Q9BUE6 129 aa18.38■□□□□ 0.53
CDR2-204ENST00000564542 GLIS2Q9BZE0 524 aaPredicted RBP18.38■□□□□ 0.53
CDR2-204ENST00000564542 DBF4Q9UBU7 674 aaPredicted RBP18.38■□□□□ 0.53
CDR2-204ENST00000564542 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
CDR2-204ENST00000564542 HIRAP54198 1017 aaPredicted RBP18.37■□□□□ 0.53
CDR2-204ENST00000564542 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
CDR2-204ENST00000564542 TRPM4Q8TD43 1214 aa18.37■□□□□ 0.53
CDR2-204ENST00000564542 ABHD8Q96I13 439 aa18.37■□□□□ 0.53
CDR2-204ENST00000564542 COL4A1P02462 1669 aa18.36■□□□□ 0.53
CDR2-204ENST00000564542 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDR2-204ENST00000564542 SF3B3Q15393 1217 aaKnown RBP18.36■□□□□ 0.53
CDR2-204ENST00000564542 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
CDR2-204ENST00000564542 CNOT7Q9UIV1 285 aaKnown RBP18.36■□□□□ 0.53
CDR2-204ENST00000564542 AOC2O75106 756 aa18.35■□□□□ 0.53
CDR2-204ENST00000564542 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
CDR2-204ENST00000564542 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
CDR2-204ENST00000564542 MICALL2Q8IY33 904 aa18.35■□□□□ 0.53
CDR2-204ENST00000564542 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
CDR2-204ENST00000564542 FAM89AQ96GI7 184 aa18.35■□□□□ 0.53
CDR2-204ENST00000564542 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
CDR2-204ENST00000564542 SHTN1A0MZ66 631 aa18.34■□□□□ 0.53
CDR2-204ENST00000564542 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
CDR2-204ENST00000564542 H7C1D1 291 aa18.34■□□□□ 0.53
CDR2-204ENST00000564542 DPF2Q92785 391 aa18.34■□□□□ 0.53
CDR2-204ENST00000564542 CFAP44Q96MT7 982 aa18.34■□□□□ 0.53
CDR2-204ENST00000564542 NSFL1CQ9UNZ2 370 aaKnown RBP18.34■□□□□ 0.53
CDR2-204ENST00000564542 CA12O43570 354 aa18.33■□□□□ 0.52
CDR2-204ENST00000564542 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
CDR2-204ENST00000564542 ZNF408Q9H9D4 720 aa18.33■□□□□ 0.52
CDR2-204ENST00000564542 PSMD14O00487 310 aa18.32■□□□□ 0.52
CDR2-204ENST00000564542 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
CDR2-204ENST00000564542 TRIM28Q13263 835 aaKnown RBP18.32■□□□□ 0.52
CDR2-204ENST00000564542 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
CDR2-204ENST00000564542 DBNDD1Q9H9R9 158 aa18.32■□□□□ 0.52
CDR2-204ENST00000564542 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
CDR2-204ENST00000564542 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
CDR2-204ENST00000564542 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
CDR2-204ENST00000564542 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
CDR2-204ENST00000564542 IRS4O14654 1257 aaPredicted RBP18.31■□□□□ 0.52
CDR2-204ENST00000564542 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
CDR2-204ENST00000564542 GPSM2P81274 684 aa18.31■□□□□ 0.52
CDR2-204ENST00000564542 EYA3Q99504 573 aa18.31■□□□□ 0.52
CDR2-204ENST00000564542 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
CDR2-204ENST00000564542 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
CDR2-204ENST00000564542 RIMBP2O15034 1052 aa18.3■□□□□ 0.52
CDR2-204ENST00000564542 ECE2O60344 883 aa18.3■□□□□ 0.52
CDR2-204ENST00000564542 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
CDR2-204ENST00000564542 SAMD7Q7Z3H4 446 aa18.3■□□□□ 0.52
CDR2-204ENST00000564542 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
CDR2-204ENST00000564542 RPS8P62241 208 aaKnown RBP18.29■□□□□ 0.52
CDR2-204ENST00000564542 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
CDR2-204ENST00000564542 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
CDR2-204ENST00000564542 TBC1D16Q8TBP0 767 aa18.29■□□□□ 0.52
CDR2-204ENST00000564542 EGFRP00533 1210 aa18.28■□□□□ 0.52
CDR2-204ENST00000564542 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
CDR2-204ENST00000564542 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
CDR2-204ENST00000564542 NOGQ13253 232 aa18.28■□□□□ 0.52
CDR2-204ENST00000564542 TBC1D10BQ4KMP7 808 aaPredicted RBP18.28■□□□□ 0.52
CDR2-204ENST00000564542 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
CDR2-204ENST00000564542 ZBTB38Q8NAP3 1195 aaPredicted RBP18.28■□□□□ 0.52
CDR2-204ENST00000564542 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
CDR2-204ENST00000564542 HUNKP57058 714 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms