RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
KNOP1-202ENST00000564480 DPP8Q6V1X1 898 aaPredicted RBP18.11■□□□□ 0.49
KNOP1-202ENST00000564480 SAPCD2Q86UD0 394 aa18.11■□□□□ 0.49
KNOP1-202ENST00000564480 MPNDQ8N594 471 aa18.11■□□□□ 0.49
KNOP1-202ENST00000564480 LAMB2P55268 1798 aa18.1■□□□□ 0.49
KNOP1-202ENST00000564480 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
KNOP1-202ENST00000564480 ECE1P42892 770 aa18.1■□□□□ 0.49
KNOP1-202ENST00000564480 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
KNOP1-202ENST00000564480 TRPM4Q8TD43 1214 aa18.1■□□□□ 0.49
KNOP1-202ENST00000564480 CELF2O95319 508 aaKnown RBP18.09■□□□□ 0.49
KNOP1-202ENST00000564480 CIAPIN1Q6FI81 312 aa18.09■□□□□ 0.49
KNOP1-202ENST00000564480 SUPT20HQ8NEM7 779 aa18.09■□□□□ 0.49
KNOP1-202ENST00000564480 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
KNOP1-202ENST00000564480 TRMT112Q9UI30 125 aaKnown RBP18.09■□□□□ 0.49
KNOP1-202ENST00000564480 TRPM7Q96QT4 1865 aa18.09■□□□□ 0.49
KNOP1-202ENST00000564480 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.49
KNOP1-202ENST00000564480 TAF1P21675 1872 aa18.08■□□□□ 0.49
KNOP1-202ENST00000564480 GRAPQ13588 217 aa18.08■□□□□ 0.48
KNOP1-202ENST00000564480 GRAPLQ8TC17 118 aaPredicted RBP18.08■□□□□ 0.48
KNOP1-202ENST00000564480 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
KNOP1-202ENST00000564480 BABAM1Q9NWV8 329 aa18.08■□□□□ 0.48
KNOP1-202ENST00000564480 COL4A1P02462 1669 aa18.07■□□□□ 0.48
KNOP1-202ENST00000564480 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
KNOP1-202ENST00000564480 ZIC5Q96T25 663 aa18.07■□□□□ 0.48
KNOP1-202ENST00000564480 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
KNOP1-202ENST00000564480 SH3TC1Q8TE82 1336 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 CHL1O00533 1208 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 MAP2K2P36507 400 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 ZNF408Q9H9D4 720 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 CNOT7Q9UIV1 285 aaKnown RBP18.06■□□□□ 0.48
KNOP1-202ENST00000564480 ANKRD36CQ5JPF3 1778 aa18.06■□□□□ 0.48
KNOP1-202ENST00000564480 EGFRP00533 1210 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 TNIP1Q15025 636 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
KNOP1-202ENST00000564480 BEGAINQ9BUH8 593 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 KCNQ5Q9NR82 932 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 CHPF2Q9P2E5 772 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 TRIM35Q9UPQ4 493 aa18.05■□□□□ 0.48
KNOP1-202ENST00000564480 ZC3H15Q8WU90 426 aaKnown RBP18.04■□□□□ 0.48
KNOP1-202ENST00000564480 FAM89AQ96GI7 184 aa18.04■□□□□ 0.48
KNOP1-202ENST00000564480 CDHR2Q9BYE9 1310 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 CCDC85CA6NKD9 419 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 ATP5J2-PTCD1G3V325 749 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 CDC37L1Q7L3B6 337 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 SAMD7Q7Z3H4 446 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 USP48Q86UV5 1035 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 MICALL2Q8IY33 904 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 HHIPL1Q96JK4 782 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
KNOP1-202ENST00000564480 PSMD14O00487 310 aa18.02■□□□□ 0.48
KNOP1-202ENST00000564480 DBNDD1Q9H9R9 158 aa18.02■□□□□ 0.48
KNOP1-202ENST00000564480 POLLQ9UGP5 575 aa18.02■□□□□ 0.48
KNOP1-202ENST00000564480 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
KNOP1-202ENST00000564480 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
KNOP1-202ENST00000564480 GPSM2P81274 684 aa18.01■□□□□ 0.47
KNOP1-202ENST00000564480 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
KNOP1-202ENST00000564480 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
KNOP1-202ENST00000564480 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
KNOP1-202ENST00000564480 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
KNOP1-202ENST00000564480 NSFL1CQ9UNZ2 370 aaKnown RBP18.01■□□□□ 0.47
KNOP1-202ENST00000564480 LRRC37AA6NMS7 1700 aa18.01■□□□□ 0.47
KNOP1-202ENST00000564480 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
KNOP1-202ENST00000564480 H7C1D1 291 aa18■□□□□ 0.47
KNOP1-202ENST00000564480 BRPF1P55201 1214 aaPredicted RBP18■□□□□ 0.47
KNOP1-202ENST00000564480 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
KNOP1-202ENST00000564480 WASHC4Q2M389 1173 aa18■□□□□ 0.47
KNOP1-202ENST00000564480 TBC1D10BQ4KMP7 808 aaPredicted RBP18■□□□□ 0.47
KNOP1-202ENST00000564480 RTL9Q8NET4 1388 aa18■□□□□ 0.47
KNOP1-202ENST00000564480 RGS19P49795 217 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 RALBP1Q15311 655 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 DOK7Q18PE1 504 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 HDGFL1Q5TGJ6 251 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 TMC4Q7Z404 712 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 DPF2Q92785 391 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 MCOLN1Q9GZU1 580 aa17.99■□□□□ 0.47
KNOP1-202ENST00000564480 FAM155AB1AL88 458 aaPredicted RBP17.97■□□□□ 0.47
KNOP1-202ENST00000564480 ADM5C9JUS6 153 aa17.97■□□□□ 0.47
KNOP1-202ENST00000564480 C6orf229H3BNL8 230 aa17.97■□□□□ 0.47
KNOP1-202ENST00000564480 CA12O43570 354 aa17.97■□□□□ 0.47
KNOP1-202ENST00000564480 HUNKP57058 714 aa17.97■□□□□ 0.47
KNOP1-202ENST00000564480 RBM26Q5T8P6 1007 aaKnown RBP17.97■□□□□ 0.47
KNOP1-202ENST00000564480 ASTN2O75129 1339 aaPredicted RBP17.97■□□□□ 0.47
KNOP1-202ENST00000564480 ECE2O60344 883 aa17.96■□□□□ 0.47
KNOP1-202ENST00000564480 KRT26Q7Z3Y9 468 aa17.96■□□□□ 0.47
KNOP1-202ENST00000564480 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
KNOP1-202ENST00000564480 SEC31BQ9NQW1 1179 aa17.96■□□□□ 0.47
KNOP1-202ENST00000564480 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
KNOP1-202ENST00000564480 CASP8AP2Q9UKL3 1982 aa17.96■□□□□ 0.47
KNOP1-202ENST00000564480 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
KNOP1-202ENST00000564480 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
KNOP1-202ENST00000564480 MLLT1Q03111 559 aaPredicted RBP17.95■□□□□ 0.46
KNOP1-202ENST00000564480 NOGQ13253 232 aa17.95■□□□□ 0.46
KNOP1-202ENST00000564480 TRIM28Q13263 835 aaKnown RBP17.95■□□□□ 0.46
KNOP1-202ENST00000564480 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
KNOP1-202ENST00000564480 RUNDC1Q96C34 613 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms