RNA–Protein interactions for RNA: ENST00000564439.5

RPL4-205, Transcript of ribosomal protein L4, humanhuman

TSL 3

Gene RPL4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-205ENST00000564439 USP44Q9H0E7 712 aa13.55□□□□□ -0.24
RPL4-205ENST00000564439 COL4A1P02462 1669 aa13.54□□□□□ -0.24
RPL4-205ENST00000564439 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
RPL4-205ENST00000564439 CTSWP56202 376 aa13.54□□□□□ -0.24
RPL4-205ENST00000564439 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
RPL4-205ENST00000564439 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
RPL4-205ENST00000564439 KAZALD1Q96I82 304 aa13.54□□□□□ -0.24
RPL4-205ENST00000564439 CSF1RP07333 972 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 RLBP1P12271 317 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 FOXO4P98177 505 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 SLC51AQ86UW1 340 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
RPL4-205ENST00000564439 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 SNED1Q8TER0 1413 aa13.53□□□□□ -0.24
RPL4-205ENST00000564439 GRAPQ13588 217 aa13.52□□□□□ -0.25
RPL4-205ENST00000564439 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.25
RPL4-205ENST00000564439 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
RPL4-205ENST00000564439 GRAPLQ8TC17 118 aaPredicted RBP13.52□□□□□ -0.25
RPL4-205ENST00000564439 SEC31BQ9NQW1 1179 aa13.52□□□□□ -0.25
RPL4-205ENST00000564439 TAF1P21675 1872 aa13.52□□□□□ -0.25
RPL4-205ENST00000564439 MYH3P11055 1940 aa13.52□□□□□ -0.25
RPL4-205ENST00000564439 C21orf2O43822 256 aa13.51□□□□□ -0.25
RPL4-205ENST00000564439 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
RPL4-205ENST00000564439 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
RPL4-205ENST00000564439 TMEM57Q8N5G2 664 aa13.51□□□□□ -0.25
RPL4-205ENST00000564439 CELF1Q92879 486 aaKnown RBP13.51□□□□□ -0.25
RPL4-205ENST00000564439 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
RPL4-205ENST00000564439 GREM2Q9H772 168 aa13.51□□□□□ -0.25
RPL4-205ENST00000564439 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
RPL4-205ENST00000564439 PLIN1O60240 522 aa13.5□□□□□ -0.25
RPL4-205ENST00000564439 BBOX1O75936 387 aa13.5□□□□□ -0.25
RPL4-205ENST00000564439 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
RPL4-205ENST00000564439 ANKRD44Q8N8A2 993 aa13.5□□□□□ -0.25
RPL4-205ENST00000564439 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
RPL4-205ENST00000564439 MEIS3Q99687 375 aa13.5□□□□□ -0.25
RPL4-205ENST00000564439 NFKBIEO00221 500 aa13.49□□□□□ -0.25
RPL4-205ENST00000564439 PPEF1O14829 653 aaPredicted RBP13.49□□□□□ -0.25
RPL4-205ENST00000564439 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
RPL4-205ENST00000564439 RABL6Q3YEC7 729 aaPredicted RBP13.49□□□□□ -0.25
RPL4-205ENST00000564439 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
RPL4-205ENST00000564439 PANK1Q8TE04 598 aa13.49□□□□□ -0.25
RPL4-205ENST00000564439 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
RPL4-205ENST00000564439 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
RPL4-205ENST00000564439 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
RPL4-205ENST00000564439 FER1L6Q2WGJ9 1857 aa13.48□□□□□ -0.25
RPL4-205ENST00000564439 PRELPP51888 382 aa13.48□□□□□ -0.25
RPL4-205ENST00000564439 RPS8P62241 208 aaKnown RBP13.48□□□□□ -0.25
RPL4-205ENST00000564439 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
RPL4-205ENST00000564439 ARHGAP27Q6ZUM4 889 aa13.48□□□□□ -0.25
RPL4-205ENST00000564439 FTSJ3Q8IY81 847 aaKnown RBP13.48□□□□□ -0.25
RPL4-205ENST00000564439 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
RPL4-205ENST00000564439 ITGA6P23229 1130 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
RPL4-205ENST00000564439 GNAI3P08754 354 aa13.46□□□□□ -0.25
RPL4-205ENST00000564439 RASSF7Q02833 373 aa13.46□□□□□ -0.25
RPL4-205ENST00000564439 C20orf194Q5TEA3 1177 aa13.46□□□□□ -0.25
RPL4-205ENST00000564439 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
RPL4-205ENST00000564439 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
RPL4-205ENST00000564439 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
RPL4-205ENST00000564439 MS4A1P11836 297 aa13.45□□□□□ -0.26
RPL4-205ENST00000564439 IFIT5Q13325 482 aaKnown RBP13.45□□□□□ -0.26
RPL4-205ENST00000564439 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
RPL4-205ENST00000564439 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
RPL4-205ENST00000564439 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
RPL4-205ENST00000564439 ITPRIPQ8IWB1 547 aa13.45□□□□□ -0.26
RPL4-205ENST00000564439 PSMD1Q99460 953 aa13.45□□□□□ -0.26
RPL4-205ENST00000564439 BSDC1Q9NW68 430 aaPredicted RBP13.45□□□□□ -0.26
RPL4-205ENST00000564439 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
RPL4-205ENST00000564439 SBF1O95248 1867 aa13.44□□□□□ -0.26
RPL4-205ENST00000564439 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
RPL4-205ENST00000564439 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPL4-205ENST00000564439 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
RPL4-205ENST00000564439 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
RPL4-205ENST00000564439 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
RPL4-205ENST00000564439 DUOX1Q9NRD9 1551 aa13.44□□□□□ -0.26
RPL4-205ENST00000564439 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
RPL4-205ENST00000564439 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
RPL4-205ENST00000564439 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
RPL4-205ENST00000564439 MTX1Q13505 466 aa13.43□□□□□ -0.26
RPL4-205ENST00000564439 MVPQ14764 893 aaKnown RBP13.43□□□□□ -0.26
RPL4-205ENST00000564439 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
RPL4-205ENST00000564439 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
RPL4-205ENST00000564439 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
RPL4-205ENST00000564439 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
RPL4-205ENST00000564439 CHMP3Q9Y3E7 222 aa13.43□□□□□ -0.26
RPL4-205ENST00000564439 GNAI2P04899 355 aa13.42□□□□□ -0.26
RPL4-205ENST00000564439 LMNB1P20700 586 aa13.42□□□□□ -0.26
RPL4-205ENST00000564439 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
RPL4-205ENST00000564439 GPSM2P81274 684 aa13.42□□□□□ -0.26
RPL4-205ENST00000564439 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
RPL4-205ENST00000564439 ZNF594Q96JF6 807 aaPredicted RBP13.42□□□□□ -0.26
RPL4-205ENST00000564439 MINPP1Q9UNW1 487 aa13.42□□□□□ -0.26
RPL4-205ENST00000564439 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms