RNA–Protein interactions for RNA: ENST00000564316.1

STUB1-203, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-203ENST00000564316 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
STUB1-203ENST00000564316 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
STUB1-203ENST00000564316 TTLL11Q8NHH1 800 aa17.36■□□□□ 0.37
STUB1-203ENST00000564316 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
STUB1-203ENST00000564316 MEIS3Q99687 375 aa17.36■□□□□ 0.37
STUB1-203ENST00000564316 LAMB2P55268 1798 aa17.35■□□□□ 0.37
STUB1-203ENST00000564316 UBTFL1P0CB47 393 aaPredicted RBP17.35■□□□□ 0.37
STUB1-203ENST00000564316 FOXO4P98177 505 aa17.35■□□□□ 0.37
STUB1-203ENST00000564316 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
STUB1-203ENST00000564316 EPHA10Q5JZY3 1008 aa17.35■□□□□ 0.37
STUB1-203ENST00000564316 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
STUB1-203ENST00000564316 KAZALD1Q96I82 304 aa17.35■□□□□ 0.37
STUB1-203ENST00000564316 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
STUB1-203ENST00000564316 CSF1RP07333 972 aa17.34■□□□□ 0.37
STUB1-203ENST00000564316 YBX3P16989 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
STUB1-203ENST00000564316 GPR162Q16538 588 aa17.34■□□□□ 0.37
STUB1-203ENST00000564316 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
STUB1-203ENST00000564316 GOLGB1Q14789 3259 aaKnown RBP17.33■□□□□ 0.37
STUB1-203ENST00000564316 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
STUB1-203ENST00000564316 GNAI3P08754 354 aa17.33■□□□□ 0.36
STUB1-203ENST00000564316 GRAPQ13588 217 aa17.33■□□□□ 0.36
STUB1-203ENST00000564316 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
STUB1-203ENST00000564316 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
STUB1-203ENST00000564316 BICC1Q9H694 974 aaKnown RBP17.33■□□□□ 0.36
STUB1-203ENST00000564316 GREM2Q9H772 168 aa17.33■□□□□ 0.36
STUB1-203ENST00000564316 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
STUB1-203ENST00000564316 MVPQ14764 893 aaKnown RBP17.32■□□□□ 0.36
STUB1-203ENST00000564316 FAM161AQ3B820 660 aa17.32■□□□□ 0.36
STUB1-203ENST00000564316 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
STUB1-203ENST00000564316 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
STUB1-203ENST00000564316 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
STUB1-203ENST00000564316 COG6Q9Y2V7 657 aa17.32■□□□□ 0.36
STUB1-203ENST00000564316 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
STUB1-203ENST00000564316 RABL6Q3YEC7 729 aaPredicted RBP17.31■□□□□ 0.36
STUB1-203ENST00000564316 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
STUB1-203ENST00000564316 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
STUB1-203ENST00000564316 ZNF219Q9P2Y4 722 aaPredicted RBP17.31■□□□□ 0.36
STUB1-203ENST00000564316 CHMP3Q9Y3E7 222 aa17.31■□□□□ 0.36
STUB1-203ENST00000564316 LRRFIP2Q9Y608 721 aaKnown RBP17.31■□□□□ 0.36
STUB1-203ENST00000564316 BRCA1P38398 1863 aaKnown RBP17.31■□□□□ 0.36
STUB1-203ENST00000564316 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
STUB1-203ENST00000564316 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
STUB1-203ENST00000564316 C21orf2O43822 256 aa17.3■□□□□ 0.36
STUB1-203ENST00000564316 BBOX1O75936 387 aa17.3■□□□□ 0.36
STUB1-203ENST00000564316 ITGA6P23229 1130 aa17.3■□□□□ 0.36
STUB1-203ENST00000564316 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
STUB1-203ENST00000564316 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
STUB1-203ENST00000564316 UTRNP46939 3433 aa17.29■□□□□ 0.36
STUB1-203ENST00000564316 GRIN3BO60391 1043 aa17.29■□□□□ 0.36
STUB1-203ENST00000564316 GNAI2P04899 355 aa17.29■□□□□ 0.36
STUB1-203ENST00000564316 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
STUB1-203ENST00000564316 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 IFIT5Q13325 482 aaKnown RBP17.28■□□□□ 0.36
STUB1-203ENST00000564316 SOGA3Q5TF21 947 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 OLFM4Q6UX06 510 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
STUB1-203ENST00000564316 COL4A1P02462 1669 aa17.28■□□□□ 0.36
STUB1-203ENST00000564316 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
STUB1-203ENST00000564316 CCDC93Q567U6 631 aa17.27■□□□□ 0.36
STUB1-203ENST00000564316 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
STUB1-203ENST00000564316 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
STUB1-203ENST00000564316 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
STUB1-203ENST00000564316 CC2D2BQ6DHV5 1058 aa17.26■□□□□ 0.35
STUB1-203ENST00000564316 SP8Q8IXZ3 490 aa17.26■□□□□ 0.35
STUB1-203ENST00000564316 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
STUB1-203ENST00000564316 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
STUB1-203ENST00000564316 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
STUB1-203ENST00000564316 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
STUB1-203ENST00000564316 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
STUB1-203ENST00000564316 MYH3P11055 1940 aa17.24■□□□□ 0.35
STUB1-203ENST00000564316 MTX1Q13505 466 aa17.24■□□□□ 0.35
STUB1-203ENST00000564316 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
STUB1-203ENST00000564316 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
STUB1-203ENST00000564316 ZBTB40Q9NUA8 1239 aa17.24■□□□□ 0.35
STUB1-203ENST00000564316 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
STUB1-203ENST00000564316 NFKBIEO00221 500 aa17.23■□□□□ 0.35
STUB1-203ENST00000564316 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
STUB1-203ENST00000564316 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
STUB1-203ENST00000564316 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
STUB1-203ENST00000564316 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
STUB1-203ENST00000564316 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
STUB1-203ENST00000564316 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
STUB1-203ENST00000564316 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
STUB1-203ENST00000564316 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
STUB1-203ENST00000564316 RASSF7Q02833 373 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 MPNDQ8N594 471 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 MINPP1Q9UNW1 487 aa17.21■□□□□ 0.35
STUB1-203ENST00000564316 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
STUB1-203ENST00000564316 TAF1P21675 1872 aa17.2■□□□□ 0.34
STUB1-203ENST00000564316 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
STUB1-203ENST00000564316 GPSM2P81274 684 aa17.2■□□□□ 0.34
STUB1-203ENST00000564316 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
STUB1-203ENST00000564316 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms