RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GRAPQ13588 217 aa21.04■□□□□ 0.96
RNF40-206ENST00000564260 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
RNF40-206ENST00000564260 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
RNF40-206ENST00000564260 GRAPLQ8TC17 118 aaPredicted RBP21.04■□□□□ 0.96
RNF40-206ENST00000564260 FRAT1Q92837 279 aaPredicted RBP21.04■□□□□ 0.96
RNF40-206ENST00000564260 TMX4Q9H1E5 349 aaPredicted RBP21.04■□□□□ 0.96
RNF40-206ENST00000564260 C3orf67Q6ZVT6 689 aa21.03■□□□□ 0.96
RNF40-206ENST00000564260 C7orf43Q8WVR3 580 aa21.03■□□□□ 0.96
RNF40-206ENST00000564260 LTBP3Q9NS15 1303 aa21.03■□□□□ 0.96
RNF40-206ENST00000564260 CSF1RP07333 972 aa21.02■□□□□ 0.96
RNF40-206ENST00000564260 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
RNF40-206ENST00000564260 FTSJ3Q8IY81 847 aaKnown RBP21.02■□□□□ 0.96
RNF40-206ENST00000564260 RTKN2Q8IZC4 609 aa21.02■□□□□ 0.96
RNF40-206ENST00000564260 TTLL11Q8NHH1 800 aa21.02■□□□□ 0.96
RNF40-206ENST00000564260 CCDC93Q567U6 631 aa21.01■□□□□ 0.95
RNF40-206ENST00000564260 CDC5LQ99459 802 aaKnown RBP21.01■□□□□ 0.95
RNF40-206ENST00000564260 USP44Q9H0E7 712 aa21.01■□□□□ 0.95
RNF40-206ENST00000564260 UTRNP46939 3433 aa21.01■□□□□ 0.95
RNF40-206ENST00000564260 PPEF1O14829 653 aaPredicted RBP21■□□□□ 0.95
RNF40-206ENST00000564260 GNAI3P08754 354 aa21■□□□□ 0.95
RNF40-206ENST00000564260 DZIP1LQ8IYY4 767 aaKnown RBP21■□□□□ 0.95
RNF40-206ENST00000564260 ATP6V0A2Q9Y487 856 aa21■□□□□ 0.95
RNF40-206ENST00000564260 SP8Q8IXZ3 490 aa20.99■□□□□ 0.95
RNF40-206ENST00000564260 C21orf2O43822 256 aa20.98■□□□□ 0.95
RNF40-206ENST00000564260 NBPF7P0C2Y1 421 aaPredicted RBP20.98■□□□□ 0.95
RNF40-206ENST00000564260 RPS8P62241 208 aaKnown RBP20.98■□□□□ 0.95
RNF40-206ENST00000564260 RABL6Q3YEC7 729 aaPredicted RBP20.98■□□□□ 0.95
RNF40-206ENST00000564260 CHMP4BQ9H444 224 aaKnown RBP20.98■□□□□ 0.95
RNF40-206ENST00000564260 UBTFL1P0CB47 393 aaPredicted RBP20.97■□□□□ 0.95
RNF40-206ENST00000564260 FOXO4P98177 505 aa20.97■□□□□ 0.95
RNF40-206ENST00000564260 PSMD1Q99460 953 aa20.97■□□□□ 0.95
RNF40-206ENST00000564260 VPS33BQ9H267 617 aa20.97■□□□□ 0.95
RNF40-206ENST00000564260 ZC3H4Q9UPT8 1303 aaKnown RBP20.97■□□□□ 0.95
RNF40-206ENST00000564260 PDE3AQ14432 1141 aa20.96■□□□□ 0.95
RNF40-206ENST00000564260 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
RNF40-206ENST00000564260 ANKRD18AQ8IVF6 992 aa20.96■□□□□ 0.95
RNF40-206ENST00000564260 MYH3P11055 1940 aa20.96■□□□□ 0.95
RNF40-206ENST00000564260 SNED1Q8TER0 1413 aa20.95■□□□□ 0.95
RNF40-206ENST00000564260 SLX4Q8IY92 1834 aa20.95■□□□□ 0.94
RNF40-206ENST00000564260 IFIT5Q13325 482 aaKnown RBP20.95■□□□□ 0.94
RNF40-206ENST00000564260 JARID2Q92833 1246 aaPredicted RBP20.95■□□□□ 0.94
RNF40-206ENST00000564260 TAOK3Q9H2K8 898 aa20.95■□□□□ 0.94
RNF40-206ENST00000564260 GREM2Q9H772 168 aa20.95■□□□□ 0.94
RNF40-206ENST00000564260 ANKRD18BA2A2Z9 1011 aa20.94■□□□□ 0.94
RNF40-206ENST00000564260 ITGA6P23229 1130 aa20.94■□□□□ 0.94
RNF40-206ENST00000564260 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.94
RNF40-206ENST00000564260 SUPT20HQ8NEM7 779 aa20.94■□□□□ 0.94
RNF40-206ENST00000564260 SUCLG2Q96I99 432 aa20.94■□□□□ 0.94
RNF40-206ENST00000564260 BSDC1Q9NW68 430 aaPredicted RBP20.94■□□□□ 0.94
RNF40-206ENST00000564260 WWC3Q9ULE0 1092 aa20.94■□□□□ 0.94
RNF40-206ENST00000564260 LMNB1P20700 586 aa20.93■□□□□ 0.94
RNF40-206ENST00000564260 IGHMBP2P38935 993 aaKnown RBP20.93■□□□□ 0.94
RNF40-206ENST00000564260 CCDC57Q2TAC2 916 aa20.93■□□□□ 0.94
RNF40-206ENST00000564260 LMBR1LQ6UX01 489 aa20.93■□□□□ 0.94
RNF40-206ENST00000564260 TMEM57Q8N5G2 664 aa20.93■□□□□ 0.94
RNF40-206ENST00000564260 CELF1Q92879 486 aaKnown RBP20.93■□□□□ 0.94
RNF40-206ENST00000564260 CLUAP1Q96AJ1 413 aa20.93■□□□□ 0.94
RNF40-206ENST00000564260 KAZALD1Q96I82 304 aa20.93■□□□□ 0.94
RNF40-206ENST00000564260 NFKBIEO00221 500 aa20.92■□□□□ 0.94
RNF40-206ENST00000564260 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
RNF40-206ENST00000564260 RTFDC1Q9BY42 306 aaPredicted RBP20.92■□□□□ 0.94
RNF40-206ENST00000564260 LRRC37AA6NMS7 1700 aa20.92■□□□□ 0.94
RNF40-206ENST00000564260 BICC1Q9H694 974 aaKnown RBP20.91■□□□□ 0.94
RNF40-206ENST00000564260 SEC31BQ9NQW1 1179 aa20.91■□□□□ 0.94
RNF40-206ENST00000564260 PODXL2Q9NZ53 605 aa20.91■□□□□ 0.94
RNF40-206ENST00000564260 FER1L6Q2WGJ9 1857 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 GNAI2P04899 355 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 EPHA10Q5JZY3 1008 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 MPHOSPH8Q99549 860 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 MEIS3Q99687 375 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 FBXO3Q9UK99 471 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 DDX19BQ9UMR2 479 aa20.9■□□□□ 0.94
RNF40-206ENST00000564260 MTX1Q13505 466 aa20.89■□□□□ 0.93
RNF40-206ENST00000564260 DPP8Q6V1X1 898 aaPredicted RBP20.89■□□□□ 0.93
RNF40-206ENST00000564260 ITPRIPQ8IWB1 547 aa20.89■□□□□ 0.93
RNF40-206ENST00000564260 MPNDQ8N594 471 aa20.89■□□□□ 0.93
RNF40-206ENST00000564260 ANKRD44Q8N8A2 993 aa20.89■□□□□ 0.93
RNF40-206ENST00000564260 RLBP1P12271 317 aa20.88■□□□□ 0.93
RNF40-206ENST00000564260 MVPQ14764 893 aaKnown RBP20.88■□□□□ 0.93
RNF40-206ENST00000564260 ANKRD2Q9GZV1 360 aa20.88■□□□□ 0.93
RNF40-206ENST00000564260 CHMP3Q9Y3E7 222 aa20.88■□□□□ 0.93
RNF40-206ENST00000564260 XDHP47989 1333 aa20.87■□□□□ 0.93
RNF40-206ENST00000564260 CHD4Q14839 1912 aa20.87■□□□□ 0.93
RNF40-206ENST00000564260 ZBTB7BO15156 539 aaPredicted RBP20.87■□□□□ 0.93
RNF40-206ENST00000564260 TAF7LQ5H9L4 462 aa20.87■□□□□ 0.93
RNF40-206ENST00000564260 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
RNF40-206ENST00000564260 ZNF219Q9P2Y4 722 aaPredicted RBP20.87■□□□□ 0.93
RNF40-206ENST00000564260 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
RNF40-206ENST00000564260 EYA3Q99504 573 aa20.86■□□□□ 0.93
RNF40-206ENST00000564260 LRRFIP2Q9Y608 721 aaKnown RBP20.86■□□□□ 0.93
RNF40-206ENST00000564260 CACNA1SQ13698 1873 aa20.86■□□□□ 0.93
RNF40-206ENST00000564260 RRP1P56182 461 aaKnown RBP20.85■□□□□ 0.93
RNF40-206ENST00000564260 C9orf131Q5VYM1 1079 aa20.85■□□□□ 0.93
RNF40-206ENST00000564260 MINPP1Q9UNW1 487 aa20.85■□□□□ 0.93
RNF40-206ENST00000564260 ATP2B4P23634 1241 aa20.84■□□□□ 0.93
RNF40-206ENST00000564260 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
RNF40-206ENST00000564260 RASSF7Q02833 373 aa20.84■□□□□ 0.93
RNF40-206ENST00000564260 LDHAL6AQ6ZMR3 332 aa20.84■□□□□ 0.93
RNF40-206ENST00000564260 PANK1Q8TE04 598 aa20.84■□□□□ 0.93
RNF40-206ENST00000564260 RNF181Q9P0P0 153 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms