RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
UBFD1-203ENST00000564106 KIF6Q6ZMV9 814 aa12.26□□□□□ -0.45
UBFD1-203ENST00000564106 COPS6Q7L5N1 327 aa12.26□□□□□ -0.45
UBFD1-203ENST00000564106 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
UBFD1-203ENST00000564106 ERBB4Q15303 1308 aa12.26□□□□□ -0.45
UBFD1-203ENST00000564106 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
UBFD1-203ENST00000564106 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
UBFD1-203ENST00000564106 FKBP4Q02790 459 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBFD1-203ENST00000564106 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
UBFD1-203ENST00000564106 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
UBFD1-203ENST00000564106 TMEM57Q8N5G2 664 aa12.25□□□□□ -0.45
UBFD1-203ENST00000564106 DUOX1Q9NRD9 1551 aa12.25□□□□□ -0.45
UBFD1-203ENST00000564106 VEGFAP15692 232 aaPredicted RBP12.24□□□□□ -0.45
UBFD1-203ENST00000564106 FSTL1Q12841 308 aa12.24□□□□□ -0.45
UBFD1-203ENST00000564106 INTS3Q68E01 1043 aaKnown RBP12.24□□□□□ -0.45
UBFD1-203ENST00000564106 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
UBFD1-203ENST00000564106 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
UBFD1-203ENST00000564106 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-203ENST00000564106 HOXA10P31260 410 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-203ENST00000564106 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
UBFD1-203ENST00000564106 NLRP10Q86W26 655 aa12.23□□□□□ -0.45
UBFD1-203ENST00000564106 C16orf71Q8IYS4 520 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-203ENST00000564106 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
UBFD1-203ENST00000564106 SCN4AP35499 1836 aa12.23□□□□□ -0.45
UBFD1-203ENST00000564106 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
UBFD1-203ENST00000564106 GTF2E1P29083 439 aaPredicted RBP12.22□□□□□ -0.45
UBFD1-203ENST00000564106 FLIIQ13045 1269 aa12.22□□□□□ -0.45
UBFD1-203ENST00000564106 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
UBFD1-203ENST00000564106 DDX21Q9NR30 783 aaKnown RBP eCLIP12.22□□□□□ -0.45
UBFD1-203ENST00000564106 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
UBFD1-203ENST00000564106 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
UBFD1-203ENST00000564106 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.45
UBFD1-203ENST00000564106 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
UBFD1-203ENST00000564106 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
UBFD1-203ENST00000564106 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
UBFD1-203ENST00000564106 FZD9O00144 591 aa12.2□□□□□ -0.46
UBFD1-203ENST00000564106 PPEF1O14829 653 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-203ENST00000564106 TCIRG1Q13488 830 aa12.2□□□□□ -0.46
UBFD1-203ENST00000564106 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-203ENST00000564106 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
UBFD1-203ENST00000564106 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
UBFD1-203ENST00000564106 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-203ENST00000564106 UTP14AQ9BVJ6 771 aaKnown RBP12.2□□□□□ -0.46
UBFD1-203ENST00000564106 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-203ENST00000564106 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
UBFD1-203ENST00000564106 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
UBFD1-203ENST00000564106 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
UBFD1-203ENST00000564106 FMR1Q06787 632 aaKnown RBP eCLIP12.19□□□□□ -0.466e-7■■□□□ 13.9
UBFD1-203ENST00000564106 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
UBFD1-203ENST00000564106 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
UBFD1-203ENST00000564106 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
UBFD1-203ENST00000564106 PSMD1Q99460 953 aa12.19□□□□□ -0.46
UBFD1-203ENST00000564106 ISCA1Q9BUE6 129 aa12.19□□□□□ -0.46
UBFD1-203ENST00000564106 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
UBFD1-203ENST00000564106 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
UBFD1-203ENST00000564106 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
UBFD1-203ENST00000564106 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
UBFD1-203ENST00000564106 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
UBFD1-203ENST00000564106 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
UBFD1-203ENST00000564106 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
UBFD1-203ENST00000564106 AOC3Q16853 763 aa12.17□□□□□ -0.46
UBFD1-203ENST00000564106 DPY19L2Q6NUT2 758 aa12.17□□□□□ -0.46
UBFD1-203ENST00000564106 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
UBFD1-203ENST00000564106 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
UBFD1-203ENST00000564106 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
UBFD1-203ENST00000564106 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
UBFD1-203ENST00000564106 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-203ENST00000564106 GNAI3P08754 354 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 SCNN1DP51172 638 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 SLC4A10Q6U841 1118 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 G2E3Q7L622 706 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 PLBD2Q8NHP8 589 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
UBFD1-203ENST00000564106 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
UBFD1-203ENST00000564106 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
UBFD1-203ENST00000564106 EPS15P42566 896 aa12.15□□□□□ -0.46
UBFD1-203ENST00000564106 EAPPQ56P03 285 aaPredicted RBP12.15□□□□□ -0.46
UBFD1-203ENST00000564106 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
UBFD1-203ENST00000564106 RPAP2Q8IXW5 612 aaPredicted RBP12.15□□□□□ -0.46
UBFD1-203ENST00000564106 GCC1Q96CN9 775 aa12.15□□□□□ -0.46
UBFD1-203ENST00000564106 NLRP3Q96P20 1036 aa12.15□□□□□ -0.46
UBFD1-203ENST00000564106 GPR101Q96P66 508 aaPredicted RBP12.15□□□□□ -0.46
UBFD1-203ENST00000564106 SCN9AQ15858 1988 aa12.15□□□□□ -0.46
UBFD1-203ENST00000564106 SH3TC1Q8TE82 1336 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 SPEF2Q9C093 1822 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 IGHDP01880 384 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 EPHX2P34913 555 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 MAP1SQ66K74 1059 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-203ENST00000564106 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 SRCIN1Q9C0H9 1055 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 GJA3Q9Y6H8 435 aa12.14□□□□□ -0.47
UBFD1-203ENST00000564106 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 HMMRO75330 724 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 GRAPQ13588 217 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 COL13A1Q5TAT6 717 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms