RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 TCERG1O14776 1098 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-203ENST00000563869 NIP7Q9Y221 180 aaKnown RBP eCLIP23.93■■□□□ 1.42
SYNGR3-203ENST00000563869 MAP3K2Q9Y2U5 619 aa23.93■■□□□ 1.42
SYNGR3-203ENST00000563869 ZNF541Q9H0D2 1346 aa23.92■■□□□ 1.42
SYNGR3-203ENST00000563869 RTKN2Q8IZC4 609 aa23.92■■□□□ 1.42
SYNGR3-203ENST00000563869 CCDC191Q8NCU4 936 aa23.92■■□□□ 1.42
SYNGR3-203ENST00000563869 HACL1Q9UJ83 578 aa23.92■■□□□ 1.42
SYNGR3-203ENST00000563869 VEGFBP49765 207 aa23.91■■□□□ 1.42
SYNGR3-203ENST00000563869 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-203ENST00000563869 ZKSCAN2Q63HK3 967 aa23.91■■□□□ 1.42
SYNGR3-203ENST00000563869 ZNF34Q8IZ26 560 aa23.91■■□□□ 1.42
SYNGR3-203ENST00000563869 ZNF277Q9NRM2 450 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-203ENST00000563869 G2E3Q7L622 706 aa23.9■■□□□ 1.42
SYNGR3-203ENST00000563869 LINS1Q8NG48 757 aa23.9■■□□□ 1.42
SYNGR3-203ENST00000563869 BCL2L13Q9BXK5 485 aa23.9■■□□□ 1.42
SYNGR3-203ENST00000563869 HDAC5Q9UQL6 1122 aa23.9■■□□□ 1.42
SYNGR3-203ENST00000563869 ALDH1B1P30837 517 aa23.89■■□□□ 1.41
SYNGR3-203ENST00000563869 EPHX2P34913 555 aa23.89■■□□□ 1.41
SYNGR3-203ENST00000563869 CTCFP49711 727 aaPredicted RBP23.89■■□□□ 1.41
SYNGR3-203ENST00000563869 HLFQ16534 295 aa23.89■■□□□ 1.41
SYNGR3-203ENST00000563869 AIDAQ96BJ3 306 aa23.89■■□□□ 1.41
SYNGR3-203ENST00000563869 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.41
SYNGR3-203ENST00000563869 ALDH1L1O75891 902 aa23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 CCT4P50991 539 aaKnown RBP23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 OLFM4Q6UX06 510 aa23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 ATF7IPQ6VMQ6 1270 aa23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 PNMA8AQ86V59 439 aaPredicted RBP23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 ISCA1Q9BUE6 129 aa23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 NOB1Q9ULX3 412 aaKnown RBP23.88■■□□□ 1.41
SYNGR3-203ENST00000563869 FZD9O00144 591 aa23.87■■□□□ 1.41
SYNGR3-203ENST00000563869 GTF2E1P29083 439 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-203ENST00000563869 IARSP41252 1262 aaKnown RBP23.87■■□□□ 1.41
SYNGR3-203ENST00000563869 UTP14AQ9BVJ6 771 aaKnown RBP23.87■■□□□ 1.41
SYNGR3-203ENST00000563869 CWC25Q9NXE8 425 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-203ENST00000563869 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
SYNGR3-203ENST00000563869 MYD88Q99836 296 aa23.86■■□□□ 1.41
SYNGR3-203ENST00000563869 SRCIN1Q9C0H9 1055 aa23.86■■□□□ 1.41
SYNGR3-203ENST00000563869 CHMP4BQ9H444 224 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-203ENST00000563869 WBP1LQ9NX94 342 aa23.86■■□□□ 1.41
SYNGR3-203ENST00000563869 RIC1Q4ADV7 1423 aa23.85■■□□□ 1.41
SYNGR3-203ENST00000563869 FAM177BA6PVY3 158 aa23.85■■□□□ 1.41
SYNGR3-203ENST00000563869 FTSJ3Q8IY81 847 aaKnown RBP23.85■■□□□ 1.41
SYNGR3-203ENST00000563869 FRAT1Q92837 279 aaPredicted RBP23.85■■□□□ 1.41
SYNGR3-203ENST00000563869 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
SYNGR3-203ENST00000563869 RASSF10A6NK89 507 aa23.84■■□□□ 1.41
SYNGR3-203ENST00000563869 BCAR3O75815 825 aa23.84■■□□□ 1.41
SYNGR3-203ENST00000563869 NLRP10Q86W26 655 aa23.84■■□□□ 1.41
SYNGR3-203ENST00000563869 CNTROBQ8N137 903 aa23.84■■□□□ 1.41
SYNGR3-203ENST00000563869 GPC2Q8N158 579 aa23.84■■□□□ 1.41
SYNGR3-203ENST00000563869 CENPBP07199 599 aaPredicted RBP23.83■■□□□ 1.41
SYNGR3-203ENST00000563869 DEFB115Q30KQ5 88 aa23.83■■□□□ 1.41
SYNGR3-203ENST00000563869 MAP1SQ66K74 1059 aaPredicted RBP23.83■■□□□ 1.41
SYNGR3-203ENST00000563869 SLC4A10Q6U841 1118 aa23.83■■□□□ 1.41
SYNGR3-203ENST00000563869 PSMD1Q99460 953 aa23.83■■□□□ 1.41
SYNGR3-203ENST00000563869 SH3TC1Q8TE82 1336 aa23.83■■□□□ 1.4
SYNGR3-203ENST00000563869 GPTP24298 496 aa23.82■■□□□ 1.4
SYNGR3-203ENST00000563869 ZBTB38Q8NAP3 1195 aaPredicted RBP23.82■■□□□ 1.4
SYNGR3-203ENST00000563869 TRMT112Q9UI30 125 aaKnown RBP23.82■■□□□ 1.4
SYNGR3-203ENST00000563869 LAMB2P55268 1798 aa23.82■■□□□ 1.4
SYNGR3-203ENST00000563869 MYH3P11055 1940 aa23.82■■□□□ 1.4
SYNGR3-203ENST00000563869 NEURL1BA8MQ27 555 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 LBX1P52954 281 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 CRY2Q49AN0 593 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 BEND3Q5T5X7 828 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 CC2D2BQ6DHV5 1058 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 JDP2Q8WYK2 163 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 ABCC4O15439 1325 aa23.81■■□□□ 1.4
SYNGR3-203ENST00000563869 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
SYNGR3-203ENST00000563869 TRIM27P14373 513 aa23.8■■□□□ 1.4
SYNGR3-203ENST00000563869 PDE3AQ14432 1141 aa23.8■■□□□ 1.4
SYNGR3-203ENST00000563869 DZIP1LQ8IYY4 767 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-203ENST00000563869 UBN2Q6ZU65 1347 aa23.8■■□□□ 1.4
SYNGR3-203ENST00000563869 ATP5J2-PTCD1G3V325 749 aa23.79■■□□□ 1.4
SYNGR3-203ENST00000563869 GCKRQ14397 625 aa23.79■■□□□ 1.4
SYNGR3-203ENST00000563869 INTS3Q68E01 1043 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-203ENST00000563869 C9orf78Q9NZ63 289 aaPredicted RBP23.79■■□□□ 1.4
SYNGR3-203ENST00000563869 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
SYNGR3-203ENST00000563869 ABCC12Q96J65 1359 aa23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 F6X3S4 739 aa23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 NTSR2O95665 410 aa23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 EIF6P56537 245 aaKnown RBP23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 SUSD4Q5VX71 490 aa23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 CDHR2Q9BYE9 1310 aa23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 WDR33Q9C0J8 1336 aaKnown RBP23.78■■□□□ 1.4
SYNGR3-203ENST00000563869 COL4A5P29400 1685 aa23.77■■□□□ 1.4
SYNGR3-203ENST00000563869 IGKV5-2P06315 115 aa23.77■■□□□ 1.4
SYNGR3-203ENST00000563869 HSPA8P11142 646 aaKnown RBP23.77■■□□□ 1.4
SYNGR3-203ENST00000563869 MAP2K1Q02750 393 aaPredicted RBP23.77■■□□□ 1.4
SYNGR3-203ENST00000563869 GRIPAP1Q4V328 841 aa23.77■■□□□ 1.4
SYNGR3-203ENST00000563869 SLC10A5Q5PT55 438 aa23.77■■□□□ 1.4
SYNGR3-203ENST00000563869 NUTM1Q86Y26 1132 aa23.76■■□□□ 1.39
SYNGR3-203ENST00000563869 ABT1Q9ULW3 272 aaKnown RBP23.76■■□□□ 1.39
SYNGR3-203ENST00000563869 GJA3Q9Y6H8 435 aa23.76■■□□□ 1.39
SYNGR3-203ENST00000563869 THSD7BQ9C0I4 1608 aa23.76■■□□□ 1.39
SYNGR3-203ENST00000563869 GRM8O00222 908 aa23.75■■□□□ 1.39
SYNGR3-203ENST00000563869 LMOD1P29536 600 aaPredicted RBP23.75■■□□□ 1.39
SYNGR3-203ENST00000563869 HOXA10P31260 410 aaPredicted RBP23.75■■□□□ 1.39
SYNGR3-203ENST00000563869 NLRP3Q96P20 1036 aa23.75■■□□□ 1.39
SYNGR3-203ENST00000563869 GNAI3P08754 354 aa23.74■■□□□ 1.39
SYNGR3-203ENST00000563869 CWF19L2Q2TBE0 894 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms