RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 UTP14AQ9BVJ6 771 aaKnown RBP24.01■■□□□ 1.43
SPSB3-204ENST00000563741 PLA2G12BQ9BX93 195 aa24.01■■□□□ 1.43
SPSB3-204ENST00000563741 EXOC6BQ9Y2D4 811 aa24.01■■□□□ 1.43
SPSB3-204ENST00000563741 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
SPSB3-204ENST00000563741 A0A0G2JLW4 131 aa24■■□□□ 1.43
SPSB3-204ENST00000563741 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.43
SPSB3-204ENST00000563741 SH3TC1Q8TE82 1336 aa24■■□□□ 1.43
SPSB3-204ENST00000563741 GRIN3BO60391 1043 aa23.99■■□□□ 1.43
SPSB3-204ENST00000563741 LMBR1LQ6UX01 489 aa23.99■■□□□ 1.43
SPSB3-204ENST00000563741 CHD4Q14839 1912 aa23.99■■□□□ 1.43
SPSB3-204ENST00000563741 FAM177BA6PVY3 158 aa23.98■■□□□ 1.43
SPSB3-204ENST00000563741 IRS4O14654 1257 aaPredicted RBP23.98■■□□□ 1.43
SPSB3-204ENST00000563741 DPEP1P16444 411 aa23.98■■□□□ 1.43
SPSB3-204ENST00000563741 ANKRD45Q5TZF3 282 aa23.98■■□□□ 1.43
SPSB3-204ENST00000563741 CHD1LQ86WJ1 897 aa23.98■■□□□ 1.43
SPSB3-204ENST00000563741 SURF6O75683 361 aaKnown RBP23.96■■□□□ 1.43
SPSB3-204ENST00000563741 RFX5P48382 616 aaPredicted RBP23.96■■□□□ 1.43
SPSB3-204ENST00000563741 LNPKQ9C0E8 428 aa23.96■■□□□ 1.43
SPSB3-204ENST00000563741 NOP58Q9Y2X3 529 aaKnown RBP23.96■■□□□ 1.43
SPSB3-204ENST00000563741 BRCA1P38398 1863 aaKnown RBP23.96■■□□□ 1.43
SPSB3-204ENST00000563741 APBB1O00213 710 aa23.96■■□□□ 1.43
SPSB3-204ENST00000563741 WWC3Q9ULE0 1092 aa23.96■■□□□ 1.43
SPSB3-204ENST00000563741 PA2G4Q9UQ80 394 aaKnown RBP23.96■■□□□ 1.43
SPSB3-204ENST00000563741 RGS3P49796 1198 aa23.95■■□□□ 1.42
SPSB3-204ENST00000563741 CTSWP56202 376 aa23.95■■□□□ 1.42
SPSB3-204ENST00000563741 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
SPSB3-204ENST00000563741 KCNA3P22001 575 aa23.94■■□□□ 1.42
SPSB3-204ENST00000563741 PDE4AP27815 886 aa23.94■■□□□ 1.42
SPSB3-204ENST00000563741 PRR5LQ6MZQ0 368 aa23.94■■□□□ 1.42
SPSB3-204ENST00000563741 CHMP3Q9Y3E7 222 aa23.94■■□□□ 1.42
SPSB3-204ENST00000563741 NPHP1O15259 732 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 PDE8AO60658 829 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 CSF1RP07333 972 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 CNBD1Q8NA66 436 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 KLHDC4Q8TBB5 520 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 HCLS1P14317 486 aaPredicted RBP23.93■■□□□ 1.42
SPSB3-204ENST00000563741 CHRNA5P30532 468 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 PTPN12Q05209 780 aaKnown RBP23.93■■□□□ 1.42
SPSB3-204ENST00000563741 FAM161AQ3B820 660 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 NBPF5PQ86XG9 351 aaPredicted RBP23.93■■□□□ 1.42
SPSB3-204ENST00000563741 PIM2Q9P1W9 311 aa23.93■■□□□ 1.42
SPSB3-204ENST00000563741 LAMB2P55268 1798 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 DDX60Q8IY21 1712 aaKnown RBP23.92■■□□□ 1.42
SPSB3-204ENST00000563741 ABCC12Q96J65 1359 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 ANKRD31Q8N7Z5 1873 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 YY1P25490 414 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 TTLL11Q8NHH1 800 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 BRIP1Q9BX63 1249 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 COPRSQ9NQ92 184 aa23.92■■□□□ 1.42
SPSB3-204ENST00000563741 SMARCA5O60264 1052 aaPredicted RBP23.91■■□□□ 1.42
SPSB3-204ENST00000563741 RAB11FIP3O75154 756 aa23.91■■□□□ 1.42
SPSB3-204ENST00000563741 ERFEQ4G0M1 354 aa23.91■■□□□ 1.42
SPSB3-204ENST00000563741 HSP90AB4PQ58FF6 505 aa23.91■■□□□ 1.42
SPSB3-204ENST00000563741 LRRCC1Q9C099 1032 aa23.91■■□□□ 1.42
SPSB3-204ENST00000563741 NYXQ9GZU5 481 aa23.91■■□□□ 1.42
SPSB3-204ENST00000563741 BCS1LQ9Y276 419 aa23.91■■□□□ 1.42
SPSB3-204ENST00000563741 ST5P78524 1137 aa23.9■■□□□ 1.42
SPSB3-204ENST00000563741 MYH3P11055 1940 aa23.9■■□□□ 1.42
SPSB3-204ENST00000563741 HSP90B1P14625 803 aaKnown RBP23.9■■□□□ 1.42
SPSB3-204ENST00000563741 PDE6BP35913 854 aa23.9■■□□□ 1.42
SPSB3-204ENST00000563741 TPTE2Q6XPS3 522 aa23.9■■□□□ 1.42
SPSB3-204ENST00000563741 CCDC85AQ96PX6 553 aaPredicted RBP23.9■■□□□ 1.42
SPSB3-204ENST00000563741 SIL1Q9H173 461 aa23.9■■□□□ 1.42
SPSB3-204ENST00000563741 DLEC1Q9Y238 1755 aa23.89■■□□□ 1.42
SPSB3-204ENST00000563741 H0YIN7 160 aa23.89■■□□□ 1.41
SPSB3-204ENST00000563741 C2CD5Q86YS7 1000 aa23.89■■□□□ 1.41
SPSB3-204ENST00000563741 GREM2Q9H772 168 aa23.89■■□□□ 1.41
SPSB3-204ENST00000563741 ZBTB47Q9UFB7 747 aaPredicted RBP23.89■■□□□ 1.41
SPSB3-204ENST00000563741 OS9Q13438 667 aaPredicted RBP23.88■■□□□ 1.41
SPSB3-204ENST00000563741 DALRD3Q5D0E6 543 aaKnown RBP23.88■■□□□ 1.41
SPSB3-204ENST00000563741 CCDC24Q8N4L8 307 aa23.88■■□□□ 1.41
SPSB3-204ENST00000563741 RHPN1Q8TCX5 695 aa23.88■■□□□ 1.41
SPSB3-204ENST00000563741 KIF1BPQ96EK5 621 aa23.88■■□□□ 1.41
SPSB3-204ENST00000563741 ARFGEF1Q9Y6D6 1849 aa23.88■■□□□ 1.41
SPSB3-204ENST00000563741 CCDC57Q2TAC2 916 aa23.87■■□□□ 1.41
SPSB3-204ENST00000563741 GTF2E1P29083 439 aaPredicted RBP23.87■■□□□ 1.41
SPSB3-204ENST00000563741 IFIT5Q13325 482 aaKnown RBP23.87■■□□□ 1.41
SPSB3-204ENST00000563741 SLC10A5Q5PT55 438 aa23.87■■□□□ 1.41
SPSB3-204ENST00000563741 ERC1Q8IUD2 1116 aa23.87■■□□□ 1.41
SPSB3-204ENST00000563741 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.41
SPSB3-204ENST00000563741 ITGA6P23229 1130 aa23.85■■□□□ 1.41
SPSB3-204ENST00000563741 C3orf67Q6ZVT6 689 aa23.85■■□□□ 1.41
SPSB3-204ENST00000563741 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
SPSB3-204ENST00000563741 ZNF594Q96JF6 807 aaPredicted RBP23.85■■□□□ 1.41
SPSB3-204ENST00000563741 BCL11AQ9H165 835 aa23.85■■□□□ 1.41
SPSB3-204ENST00000563741 IL1RAPL2Q9NP60 686 aa23.85■■□□□ 1.41
SPSB3-204ENST00000563741 SASH1O94885 1247 aa23.84■■□□□ 1.41
SPSB3-204ENST00000563741 OTUD7AQ8TE49 926 aaPredicted RBP23.84■■□□□ 1.41
SPSB3-204ENST00000563741 RTL9Q8NET4 1388 aa23.84■■□□□ 1.41
SPSB3-204ENST00000563741 CCDC152Q4G0S7 254 aa23.83■■□□□ 1.41
SPSB3-204ENST00000563741 TTLL6Q8N841 843 aa23.83■■□□□ 1.41
SPSB3-204ENST00000563741 COL11A2P13942 1736 aaPredicted RBP23.82■■□□□ 1.4
SPSB3-204ENST00000563741 ANKRD18BA2A2Z9 1011 aa23.82■■□□□ 1.4
SPSB3-204ENST00000563741 ATG9AQ7Z3C6 839 aa23.82■■□□□ 1.4
SPSB3-204ENST00000563741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.82■■□□□ 1.4
SPSB3-204ENST00000563741 EYA2O00167 538 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 CIAO1O76071 339 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 SF3B3Q15393 1217 aaKnown RBP23.81■■□□□ 1.4
SPSB3-204ENST00000563741 PLEKHM2Q8IWE5 1019 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 ZNF622Q969S3 477 aaKnown RBP eCLIP23.81■■□□□ 1.43e-9■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms