RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CIAO1O76071 339 aa23.07■■□□□ 1.28
SMPD3-203ENST00000563226 CYP2E1P05181 493 aaPredicted RBP23.07■■□□□ 1.28
SMPD3-203ENST00000563226 CCDC57Q2TAC2 916 aa23.07■■□□□ 1.28
SMPD3-203ENST00000563226 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
SMPD3-203ENST00000563226 HAUS7Q99871 368 aa23.07■■□□□ 1.28
SMPD3-203ENST00000563226 GPR108Q9NPR9 543 aa23.07■■□□□ 1.28
SMPD3-203ENST00000563226 MYH3P11055 1940 aa23.06■■□□□ 1.28
SMPD3-203ENST00000563226 DDX11L8A8MPP1 907 aa23.06■■□□□ 1.28
SMPD3-203ENST00000563226 UBAP1LF5GYI3 381 aa23.06■■□□□ 1.28
SMPD3-203ENST00000563226 CUL4AQ13619 759 aa23.06■■□□□ 1.28
SMPD3-203ENST00000563226 ZNF589Q86UQ0 364 aaPredicted RBP23.06■■□□□ 1.28
SMPD3-203ENST00000563226 GBP4Q96PP9 640 aa23.06■■□□□ 1.28
SMPD3-203ENST00000563226 CWC22Q9HCG8 908 aaKnown RBP23.06■■□□□ 1.28
SMPD3-203ENST00000563226 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
SMPD3-203ENST00000563226 CSF1RP07333 972 aa23.05■■□□□ 1.28
SMPD3-203ENST00000563226 CPA1P15085 419 aa23.05■■□□□ 1.28
SMPD3-203ENST00000563226 HSP90AB3PQ58FF7 597 aa23.05■■□□□ 1.28
SMPD3-203ENST00000563226 INTS5Q6P9B9 1019 aaKnown RBP23.05■■□□□ 1.28
SMPD3-203ENST00000563226 TTC14Q96N46 770 aa23.05■■□□□ 1.28
SMPD3-203ENST00000563226 NECTIN1Q15223 517 aa23.05■■□□□ 1.28
SMPD3-203ENST00000563226 RBM8AQ9Y5S9 174 aaKnown RBP23.05■■□□□ 1.28
SMPD3-203ENST00000563226 CDHR2Q9BYE9 1310 aa23.05■■□□□ 1.28
SMPD3-203ENST00000563226 ATP6V1AP38606 617 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 ADCK5Q3MIX3 580 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
SMPD3-203ENST00000563226 MAP4K1Q92918 833 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 KCNB2Q92953 911 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 UBN2Q6ZU65 1347 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 LOC102724428A0A0B4J2F2 783 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 A0A1B0GUL7 405 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 TRAK2O60296 914 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 SIK1P57059 783 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 ITPK1Q13572 414 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 RREB1Q92766 1687 aa23.04■■□□□ 1.28
SMPD3-203ENST00000563226 KCNQ2O43526 872 aa23.03■■□□□ 1.28
SMPD3-203ENST00000563226 EIF5P55010 431 aaKnown RBP23.03■■□□□ 1.28
SMPD3-203ENST00000563226 NUCB2P80303 420 aa23.03■■□□□ 1.28
SMPD3-203ENST00000563226 FAM98CQ17RN3 349 aaKnown RBP23.03■■□□□ 1.28
SMPD3-203ENST00000563226 C8orf37Q96NL8 207 aa23.03■■□□□ 1.28
SMPD3-203ENST00000563226 ERVV-1B6SEH8 477 aa23.02■■□□□ 1.28
SMPD3-203ENST00000563226 CRKLP46109 303 aaKnown RBP23.02■■□□□ 1.28
SMPD3-203ENST00000563226 CCDC87Q9NVE4 849 aa23.02■■□□□ 1.28
SMPD3-203ENST00000563226 ZDHHC9Q9Y397 364 aa23.02■■□□□ 1.28
SMPD3-203ENST00000563226 BCL9LQ86UU0 1499 aa23.02■■□□□ 1.28
SMPD3-203ENST00000563226 JCADQ9P266 1359 aa23.02■■□□□ 1.28
SMPD3-203ENST00000563226 CASTP20810 708 aaKnown RBP23.02■■□□□ 1.28
SMPD3-203ENST00000563226 CREB3L3Q68CJ9 461 aa23.02■■□□□ 1.28
SMPD3-203ENST00000563226 CICQ96RK0 1608 aaPredicted RBP23.02■■□□□ 1.28
SMPD3-203ENST00000563226 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 AK2P54819 239 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 IFIT5Q13325 482 aaKnown RBP23.01■■□□□ 1.27
SMPD3-203ENST00000563226 CLEC17AQ6ZS10 378 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 TTLL11Q8NHH1 800 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 GREM2Q9H772 168 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 TRMT112Q9UI30 125 aaKnown RBP23.01■■□□□ 1.27
SMPD3-203ENST00000563226 RFX7Q2KHR2 1363 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 BAG4O95429 457 aaKnown RBP23.01■■□□□ 1.27
SMPD3-203ENST00000563226 JAKMIP1Q96N16 626 aaKnown RBP23.01■■□□□ 1.27
SMPD3-203ENST00000563226 LARP6Q9BRS8 491 aaKnown RBP23.01■■□□□ 1.27
SMPD3-203ENST00000563226 CEP126Q9P2H0 1117 aa23.01■■□□□ 1.27
SMPD3-203ENST00000563226 RIC1Q4ADV7 1423 aa23■■□□□ 1.27
SMPD3-203ENST00000563226 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
SMPD3-203ENST00000563226 KCNJ4P48050 445 aa23■■□□□ 1.27
SMPD3-203ENST00000563226 CTSWP56202 376 aa23■■□□□ 1.27
SMPD3-203ENST00000563226 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
SMPD3-203ENST00000563226 ZNF34Q8IZ26 560 aa23■■□□□ 1.27
SMPD3-203ENST00000563226 SEC62Q99442 399 aaKnown RBP23■■□□□ 1.27
SMPD3-203ENST00000563226 GOLIM4O00461 696 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 ADORA1P30542 326 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 COL9A3Q14050 684 aaPredicted RBP22.99■■□□□ 1.27
SMPD3-203ENST00000563226 RUFY3Q7L099 469 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 TAF6LQ9Y6J9 622 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 SLC27A2O14975 620 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 TAF5LO75529 589 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 ITGA6P23229 1130 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 CCDC129Q6ZRS4 1044 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 KBTBD3Q8NAB2 608 aa22.99■■□□□ 1.27
SMPD3-203ENST00000563226 GZF1Q9H116 711 aaPredicted RBP22.99■■□□□ 1.27
SMPD3-203ENST00000563226 COL5A3P25940 1745 aaPredicted RBP22.98■■□□□ 1.27
SMPD3-203ENST00000563226 SLFNL1Q499Z3 407 aa22.98■■□□□ 1.27
SMPD3-203ENST00000563226 INTS4Q96HW7 963 aaKnown RBP22.98■■□□□ 1.27
SMPD3-203ENST00000563226 PAG1Q9NWQ8 432 aa22.98■■□□□ 1.27
SMPD3-203ENST00000563226 FBXO3Q9UK99 471 aa22.98■■□□□ 1.27
SMPD3-203ENST00000563226 ZSWIM6Q9HCJ5 1215 aa22.97■■□□□ 1.27
SMPD3-203ENST00000563226 VPS72Q15906 364 aa22.97■■□□□ 1.27
SMPD3-203ENST00000563226 TM6SF1Q9BZW5 370 aa22.97■■□□□ 1.27
SMPD3-203ENST00000563226 IFIT1P09914 478 aaKnown RBP22.96■■□□□ 1.27
SMPD3-203ENST00000563226 RPAP1Q9BWH6 1393 aaPredicted RBP22.96■■□□□ 1.27
SMPD3-203ENST00000563226 ZKSCAN1P17029 563 aaPredicted RBP22.96■■□□□ 1.27
SMPD3-203ENST00000563226 IL27Q8NEV9 243 aa22.96■■□□□ 1.27
SMPD3-203ENST00000563226 XAGE2Q96GT9 111 aa22.96■■□□□ 1.27
SMPD3-203ENST00000563226 RIPOR2Q9Y4F9 1068 aa22.96■■□□□ 1.27
SMPD3-203ENST00000563226 CAMTA2O94983 1202 aa22.95■■□□□ 1.26
SMPD3-203ENST00000563226 LARGE1O95461 756 aa22.95■■□□□ 1.26
SMPD3-203ENST00000563226 SPEF2Q9C093 1822 aa22.95■■□□□ 1.26
SMPD3-203ENST00000563226 PDE8AO60658 829 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 FOXD4L5Q5VV16 416 aaPredicted RBP22.94■■□□□ 1.26
SMPD3-203ENST00000563226 SUSD4Q5VX71 490 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 FOXD4L4Q8WXT5 416 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms