RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TRIM6-TRIM34B2RNG4 842 aa22.1■■□□□ 1.13
COMMD4-208ENST00000563220 RGL2O15211 777 aa22.1■■□□□ 1.13
COMMD4-208ENST00000563220 IL15P40933 162 aaPredicted RBP22.1■■□□□ 1.13
COMMD4-208ENST00000563220 IFIT5Q13325 482 aaKnown RBP22.1■■□□□ 1.13
COMMD4-208ENST00000563220 TNNI3KQ59H18 835 aa22.1■■□□□ 1.13
COMMD4-208ENST00000563220 RILPL2Q969X0 211 aa22.1■■□□□ 1.13
COMMD4-208ENST00000563220 FPGT-TNNI3KV9GXZ4 949 aa22.1■■□□□ 1.13
COMMD4-208ENST00000563220 CIAO1O76071 339 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 POTEAQ6S8J7 498 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 MAP4K4O95819 1239 aaPredicted RBP22.09■■□□□ 1.13
COMMD4-208ENST00000563220 ITGA6P23229 1130 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 TBC1D9BQ66K14 1250 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 PROM2Q8N271 834 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 AK7Q96M32 723 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 C22orf23Q9BZE7 217 aa22.09■■□□□ 1.13
COMMD4-208ENST00000563220 ZPR1O75312 459 aa22.08■■□□□ 1.13
COMMD4-208ENST00000563220 GLRX3O76003 335 aaKnown RBP22.08■■□□□ 1.13
COMMD4-208ENST00000563220 BCORQ6W2J9 1755 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 ERC2O15083 957 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 TRAPPC3LQ5T215 181 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 BICDL1Q6ZP65 573 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 GPATCH3Q96I76 525 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 TAF1LQ8IZX4 1826 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 C4BP0C0L5 1744 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 PHF14O94880 888 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
COMMD4-208ENST00000563220 DBNLQ9UJU6 430 aaKnown RBP22.07■■□□□ 1.12
COMMD4-208ENST00000563220 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
COMMD4-208ENST00000563220 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
COMMD4-208ENST00000563220 ANKRD18BA2A2Z9 1011 aa22.05■■□□□ 1.12
COMMD4-208ENST00000563220 CASC1Q6TDU7 716 aa22.05■■□□□ 1.12
COMMD4-208ENST00000563220 TXNRD1Q16881 649 aa22.05■■□□□ 1.12
COMMD4-208ENST00000563220 GPR108Q9NPR9 543 aa22.05■■□□□ 1.12
COMMD4-208ENST00000563220 CHMLP26374 656 aa22.04■■□□□ 1.12
COMMD4-208ENST00000563220 RFC4P35249 363 aa22.04■■□□□ 1.12
COMMD4-208ENST00000563220 DBNDD2Q9BQY9 259 aa22.04■■□□□ 1.12
COMMD4-208ENST00000563220 TUBGCP6Q96RT7 1819 aa22.04■■□□□ 1.12
COMMD4-208ENST00000563220 TIMM10P62072 90 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 RIPOR2Q9Y4F9 1068 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 CNTROBQ8N137 903 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 CEP126Q9P2H0 1117 aa22.03■■□□□ 1.12
COMMD4-208ENST00000563220 SCN7AQ01118 1682 aa22.02■■□□□ 1.12
COMMD4-208ENST00000563220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.02■■□□□ 1.12
COMMD4-208ENST00000563220 PLSCR1O15162 318 aa22.02■■□□□ 1.12
COMMD4-208ENST00000563220 APBA3O96018 575 aa22.02■■□□□ 1.12
COMMD4-208ENST00000563220 RBM25P49756 843 aaKnown RBP22.02■■□□□ 1.12
COMMD4-208ENST00000563220 BOLA2Q9H3K6 86 aa22.02■■□□□ 1.12
COMMD4-208ENST00000563220 ADRA2BP18089 450 aa22.01■■□□□ 1.11
COMMD4-208ENST00000563220 DDRGK1Q96HY6 314 aa22.01■■□□□ 1.11
COMMD4-208ENST00000563220 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
COMMD4-208ENST00000563220 NEUROD6Q96NK8 337 aa22■■□□□ 1.11
COMMD4-208ENST00000563220 SEC31BQ9NQW1 1179 aa22■■□□□ 1.11
COMMD4-208ENST00000563220 EIF5BO60841 1220 aaKnown RBP21.99■■□□□ 1.11
COMMD4-208ENST00000563220 ATP5JP18859 108 aa21.99■■□□□ 1.11
COMMD4-208ENST00000563220 CCDC152Q4G0S7 254 aa21.99■■□□□ 1.11
COMMD4-208ENST00000563220 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
COMMD4-208ENST00000563220 ESYT1Q9BSJ8 1104 aa21.99■■□□□ 1.11
COMMD4-208ENST00000563220 USP26Q9BXU7 913 aa21.99■■□□□ 1.11
COMMD4-208ENST00000563220 A0A1B0GUL7 405 aa21.98■■□□□ 1.11
COMMD4-208ENST00000563220 SLC10A5Q5PT55 438 aa21.98■■□□□ 1.11
COMMD4-208ENST00000563220 CNNM1Q9NRU3 951 aa21.98■■□□□ 1.11
COMMD4-208ENST00000563220 EVI5LQ96CN4 794 aa21.98■■□□□ 1.11
COMMD4-208ENST00000563220 ZNF609O15014 1411 aa21.98■■□□□ 1.11
COMMD4-208ENST00000563220 MYH3P11055 1940 aa21.97■■□□□ 1.11
COMMD4-208ENST00000563220 SSFA2P28290 1259 aa21.97■■□□□ 1.11
COMMD4-208ENST00000563220 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
COMMD4-208ENST00000563220 METTL24Q5JXM2 366 aa21.97■■□□□ 1.11
COMMD4-208ENST00000563220 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
COMMD4-208ENST00000563220 NYXQ9GZU5 481 aa21.97■■□□□ 1.11
COMMD4-208ENST00000563220 RIC1Q4ADV7 1423 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 DDX60Q8IY21 1712 aaKnown RBP21.96■■□□□ 1.11
COMMD4-208ENST00000563220 IL25Q9H293 177 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 AKAP2Q9Y2D5 859 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 RTL9Q8NET4 1388 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 ABCC12Q96J65 1359 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 NFIXQ14938 502 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 SF3B3Q15393 1217 aaKnown RBP21.96■■□□□ 1.11
COMMD4-208ENST00000563220 VGLL2Q8N8G2 317 aa21.96■■□□□ 1.11
COMMD4-208ENST00000563220 REC8O95072 547 aa21.95■■□□□ 1.1
COMMD4-208ENST00000563220 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
COMMD4-208ENST00000563220 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 GYS1P13807 737 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 ADORA1P30542 326 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 CCDC24Q8N4L8 307 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 EDC3Q96F86 508 aaKnown RBP21.94■■□□□ 1.1
COMMD4-208ENST00000563220 KIF2CQ99661 725 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 SLC4A3P48751 1232 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 XAGE2Q96GT9 111 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
COMMD4-208ENST00000563220 UBR3Q6ZT12 1888 aa21.93■■□□□ 1.1
COMMD4-208ENST00000563220 ZNF827Q17R98 1081 aa21.93■■□□□ 1.1
COMMD4-208ENST00000563220 HAUS7Q99871 368 aa21.93■■□□□ 1.1
COMMD4-208ENST00000563220 PDE8BO95263 885 aa21.92■■□□□ 1.1
COMMD4-208ENST00000563220 HMGB2P26583 209 aaKnown RBP21.92■■□□□ 1.1
COMMD4-208ENST00000563220 ATP2B3Q16720 1220 aa21.92■■□□□ 1.1
COMMD4-208ENST00000563220 MPHOSPH8Q99549 860 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms