RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 RABL6Q3YEC7 729 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 SSH3Q8TE77 659 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 FAM177BA6PVY3 158 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 SEC24BO95487 1268 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 DDR1Q08345 913 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 TRIM44Q96DX7 344 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 PUS3Q9BZE2 481 aaKnown RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 DCTPP1Q9H773 170 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 USP42Q9H9J4 1324 aaKnown RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 IBTKQ9P2D0 1353 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 LTBP1Q14766 1721 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 RPS6KA4O75676 772 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 CHGBP05060 677 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 PTPN12Q05209 780 aaKnown RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
SCAPER-205ENST00000562948 NUCB1Q02818 461 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 MTX1Q13505 466 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 PANK2Q9BZ23 570 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 APBB1O00213 710 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 HCLS1P14317 486 aaPredicted RBP8.88□□□□□ -0.99
SCAPER-205ENST00000562948 ATP8B2P98198 1209 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
SCAPER-205ENST00000562948 CHD4Q14839 1912 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 ATG9AQ7Z3C6 839 aa8.88□□□□□ -0.99
SCAPER-205ENST00000562948 TM4SF1P30408 202 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 TRIM28Q13263 835 aaKnown RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 SMARCC1Q92922 1105 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 TEX13AQ9BXU3 409 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 LNPKQ9C0E8 428 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 GNAI2P04899 355 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 GSPT1P15170 499 aaKnown RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 ERFEQ4G0M1 354 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 LRRC24Q50LG9 513 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 IL25Q9H293 177 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 GREM2Q9H772 168 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 ERVV-1B6SEH8 477 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 ALDH1L1O75891 902 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 BICDL1Q6ZP65 573 aa8.87□□□□□ -0.99
SCAPER-205ENST00000562948 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 ZNF646O15015 1829 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-205ENST00000562948 RIC1Q4ADV7 1423 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 SRGAP3O43295 1099 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 UBTFL1P0CB47 393 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-205ENST00000562948 NFIXQ14938 502 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 CENPQQ7L2Z9 268 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-205ENST00000562948 TTLL11Q8NHH1 800 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 NARFQ9UHQ1 456 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 LMBR1LQ6UX01 489 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 ZBTB38Q8NAP3 1195 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-205ENST00000562948 AK9Q5TCS8 1911 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 BRCA1P38398 1863 aaKnown RBP8.86□□□□□ -0.99
SCAPER-205ENST00000562948 CSF1RP07333 972 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 KIAA1211Q6ZU35 1233 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 CCDC191Q8NCU4 936 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 SIL1Q9H173 461 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
SCAPER-205ENST00000562948 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
SCAPER-205ENST00000562948 C8orf34Q49A92 452 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 IL1RAPL2Q9NP60 686 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 CWC25Q9NXE8 425 aaPredicted RBP8.85□□□□□ -0.99
SCAPER-205ENST00000562948 LAMA3Q16787 3333 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 BECN1Q14457 450 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 SLC27A3Q5K4L6 730 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 C9orf78Q9NZ63 289 aaPredicted RBP8.85□□□□□ -0.99
SCAPER-205ENST00000562948 ZHX1Q9UKY1 873 aaPredicted RBP8.85□□□□□ -0.99
SCAPER-205ENST00000562948 NIP7Q9Y221 180 aaKnown RBP eCLIP8.85□□□□□ -0.99
SCAPER-205ENST00000562948 KIF13BQ9NQT8 1826 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 MSL1Q68DK7 614 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 OLFM4Q6UX06 510 aa8.85□□□□□ -0.99
SCAPER-205ENST00000562948 ARAP2Q8WZ64 1704 aa8.84□□□□□ -0.99
SCAPER-205ENST00000562948 SLX4Q8IY92 1834 aa8.84□□□□□ -0.99
SCAPER-205ENST00000562948 PLEKHM2Q8IWE5 1019 aa8.84□□□□□ -0.99
SCAPER-205ENST00000562948 NAP1L2Q9ULW6 460 aaPredicted RBP8.84□□□□□ -0.99
SCAPER-205ENST00000562948 POLRMTO00411 1230 aaKnown RBP8.84□□□□□ -0.99
SCAPER-205ENST00000562948 MRE11P49959 708 aa8.84□□□□□ -0.99
SCAPER-205ENST00000562948 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCAPER-205ENST00000562948 FAM13BQ9NYF5 915 aa8.84□□□□□ -0.99
SCAPER-205ENST00000562948 PCCAP05165 728 aaPredicted RBP8.84□□□□□ -1
SCAPER-205ENST00000562948 CHD1LQ86WJ1 897 aa8.84□□□□□ -1
SCAPER-205ENST00000562948 VGLL2Q8N8G2 317 aa8.84□□□□□ -1
SCAPER-205ENST00000562948 DDX58O95786 925 aaKnown RBP8.83□□□□□ -1
SCAPER-205ENST00000562948 TAF7LQ5H9L4 462 aa8.83□□□□□ -1
SCAPER-205ENST00000562948 EAF2Q96CJ1 260 aaPredicted RBP8.83□□□□□ -1
SCAPER-205ENST00000562948 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
SCAPER-205ENST00000562948 SLFNL1Q499Z3 407 aa8.83□□□□□ -1
SCAPER-205ENST00000562948 ANKRD45Q5TZF3 282 aa8.83□□□□□ -1
SCAPER-205ENST00000562948 RPAP2Q8IXW5 612 aaPredicted RBP8.83□□□□□ -1
SCAPER-205ENST00000562948 DUOX1Q9NRD9 1551 aa8.83□□□□□ -1
SCAPER-205ENST00000562948 LRRC37AA6NMS7 1700 aa8.83□□□□□ -1
SCAPER-205ENST00000562948 ARID3AQ99856 593 aa8.83□□□□□ -1
SCAPER-205ENST00000562948 GNAI3P08754 354 aa8.82□□□□□ -1
SCAPER-205ENST00000562948 KIF6Q6ZMV9 814 aa8.82□□□□□ -1
SCAPER-205ENST00000562948 SMAP1Q8IYB5 467 aaPredicted RBP8.82□□□□□ -1
SCAPER-205ENST00000562948 CHMP4BQ9H444 224 aaKnown RBP8.82□□□□□ -1
SCAPER-205ENST00000562948 TRMT112Q9UI30 125 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms