RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CSPG5O95196 566 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 SEC24BO95487 1268 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 TTC12Q9H892 705 aaPredicted RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 EXOC6BQ9Y2D4 811 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 HOXD11P31277 338 aaPredicted RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 ZNF132P52740 706 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 SFSWAPQ12872 951 aaKnown RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 RPAP2Q8IXW5 612 aaPredicted RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 VMP1Q96GC9 406 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 SENP3-EIF4A1A0A087X0R7 540 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 LSM14AQ8ND56 463 aaKnown RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 BHMTQ93088 406 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
CDH1-205ENST00000562836 IGSF5Q9NSI5 407 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 CUX1P39880 1505 aa10.88□□□□□ -0.67
CDH1-205ENST00000562836 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
CDH1-205ENST00000562836 ZNF445P59923 1031 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 TPM4P67936 248 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 GABPB2Q8TAK5 448 aaPredicted RBP10.87□□□□□ -0.67
CDH1-205ENST00000562836 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 SEL1LQ9UBV2 794 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 IP6K2Q9UHH9 426 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 BARX2Q9UMQ3 279 aaPredicted RBP10.87□□□□□ -0.67
CDH1-205ENST00000562836 ATP8A1Q9Y2Q0 1164 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 RRM1P23921 792 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 LONRF1Q17RB8 773 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 AGAP9Q5VTM2 703 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 FBXO38Q6PIJ6 1188 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 PDILTQ8N807 584 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 RTF1Q92541 710 aaKnown RBP10.87□□□□□ -0.67
CDH1-205ENST00000562836 CCDC114Q96M63 670 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 EPAS1Q99814 870 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 CAPS2Q9BXY5 557 aa10.87□□□□□ -0.67
CDH1-205ENST00000562836 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
CDH1-205ENST00000562836 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 EVA1CP58658 441 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 FILIP1LQ4L180 1135 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 CATIPQ7Z7H3 387 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 TADA2BQ86TJ2 420 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 SPO11Q9Y5K1 396 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 CAVIN2O95810 425 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 TSPY4P0CV99 314 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 TSPY10P0CW01 314 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 UBE2Q1Q7Z7E8 422 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 TMCO5AQ8N6Q1 288 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 KAT2BQ92831 832 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 TRIM4Q9C037 500 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 RTEL1Q9NZ71 1219 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 ODF2LQ9ULJ1 636 aa10.86□□□□□ -0.67
CDH1-205ENST00000562836 FKBP15Q5T1M5 1219 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 CCDC73Q6ZRK6 1079 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 SDCCAG8Q86SQ7 713 aaPredicted RBP10.85□□□□□ -0.67
CDH1-205ENST00000562836 CEP57L1Q8IYX8 460 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 SAAL1Q96ER3 474 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 IVLP07476 585 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 FOSL1P15407 271 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 THEMIS2Q5TEJ8 643 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 KIRREL3Q8IZU9 778 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 PTPRCP08575 1304 aa10.85□□□□□ -0.67
CDH1-205ENST00000562836 HOXD10P28358 340 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 ACTN2P35609 894 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 PLA2G4AP47712 749 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 POU5F1Q01860 360 aaKnown RBP10.84□□□□□ -0.67
CDH1-205ENST00000562836 CCDC92Q53HC0 331 aaPredicted RBP10.84□□□□□ -0.67
CDH1-205ENST00000562836 FOXR1Q6PIV2 292 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 SYAP1Q96A49 352 aaPredicted RBP10.84□□□□□ -0.67
CDH1-205ENST00000562836 MPP4Q96JB8 637 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 PARD6BQ9BYG5 372 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 MUC3BQ9H195 1237 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 H7C1W4 665 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 M0R2C6 588 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 LMAN1P49257 510 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 CLNS1AP54105 237 aaKnown RBP10.84□□□□□ -0.67
CDH1-205ENST00000562836 DMPKQ09013 629 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 OTUD6AQ7L8S5 288 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 TCP11Q8WWU5 503 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 EXOC4Q96A65 974 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 AK7Q96M32 723 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 A1CFQ9NQ94 594 aaKnown RBP10.84□□□□□ -0.67
CDH1-205ENST00000562836 RGL1Q9NZL6 768 aa10.84□□□□□ -0.67
CDH1-205ENST00000562836 A0A1B0GUA9 196 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 ABL1P00519 1130 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 IBSPP21815 317 aaPredicted RBP10.83□□□□□ -0.68
CDH1-205ENST00000562836 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
CDH1-205ENST00000562836 ZCCHC17Q9NP64 241 aaKnown RBP10.83□□□□□ -0.68
CDH1-205ENST00000562836 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
CDH1-205ENST00000562836 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDH1-205ENST00000562836 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDH1-205ENST00000562836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDH1-205ENST00000562836 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 ELL2O00472 640 aaPredicted RBP10.83□□□□□ -0.68
CDH1-205ENST00000562836 SLC26A4O43511 780 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 GPTP24298 496 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms